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Models based on preferential attachment have had much success in reproducing the power law degree distributions which seem ubiquitous in both natural and engineered systems. Here, rather than assuming preferential attachment, we give an…

统计力学 · 物理学 2007-05-23 N. Berger , C. Borgs , J. T. Chayes , R. M. D'Souza , R. D. Kleinberg

Pattern formation has been extensively studied in the context of evolving (time-dependent) domains in recent years, with domain growth implicated in ameliorating problems of pattern robustness and selection, in addition to more realistic…

斑图形成与孤子 · 物理学 2023-01-18 Andrew L. Krause , Eamonn A. Gaffney , Benjamin J. Walker

The binding of a ligand molecule to a protein is often accompanied by conformational changes of the protein. A central question is whether the ligand induces the conformational change (induced-fit), or rather selects and stabilizes a…

生物大分子 · 定量生物学 2008-09-04 Thomas R. Weikl , Carola von Deuster

We present an analytically solvable model for self-assembly of a molecular complex on a filament. The process is driven by a seed molecule that undergoes facilitated diffusion, which is a search strategy that combines diffusion in…

统计力学 · 物理学 2015-11-04 Ziya Kalay

By analytically solving some simple models of phase-ordering kinetics, we suggest a mechanism for the onset of non-equilibrium behaviour in colloid-polymer mixtures. These mixtures can function as models of atomic systems; their physics…

软凝聚态物质 · 物理学 2016-08-31 R. M. L. Evans , W. C. K. Poon

A linear bubble model of grain growth is introduced to study the conditions under which an isolated grain can grow to a size much larger than the surrounding matrix average (abnormal growth). We first consider the case of bubbles of two…

材料科学 · 物理学 2007-05-23 W. W. Mullins , Jorge Vinals

We study the influence of conservation laws on entanglement growth. Focusing on systems with U(1) symmetry, i.e., conservation of charge or magnetization, that exhibits diffusive dynamics, we theoretically predict the growth of…

强关联电子 · 物理学 2020-06-25 Marko Znidaric

Modeling the spontaneous evolution of morphology in natural systems and its preservation by proportionate growth remains a major scientific challenge. Yet, it is conceivable that if the basic mechanisms of growth and the coupled kinetic…

软凝聚态物质 · 物理学 2020-12-30 Virginia von Streng , Rami Abi-Akl , Bianca Giovanardi , Tal Cohen

The reaction-diffusion processes in a growing domain involves a dilution term that modifies the properties of the homogeneous state that, in contrast to a fixed domain, depends on time. We study how the dilution term changes the steady…

斑图形成与孤子 · 物理学 2023-08-24 Aldo Ledesma-Durán

In many growth processes particles are highly mobile in an active layer at the surface, but are relatively immobile once incorporated in the bulk. We study models in which atoms are allowed to interact, equilibrate, and order on the…

软凝聚态物质 · 物理学 2009-10-31 Mehran Kardar

Different types of interactions coexist and coevolve to shape the structure and function of a multiplex network. We propose here a general class of growth models in which the various layers of a multiplex network coevolve through a set of…

物理与社会 · 物理学 2014-10-15 Vincenzo Nicosia , Ginestra Bianconi , Vito Latora , Marc Barthelemy

A method that reconstructs protein residue networks using suitable node selection and edge recovery policies produced numerical observations that correlate strongly (Pearson's correlation coefficient < -0.83) with published folding rates…

生物大分子 · 定量生物学 2026-04-07 Susan Khor

In cell membranes, proteins and lipids diffuse in a highly crowded and heterogeneous landscape, where aggregates and dense domains of proteins or lipids obstruct the path of diffusing molecules. In general, hindered motion gives rise to…

软凝聚态物质 · 物理学 2010-06-16 Margaret R. Horton , Felix Höfling , Joachim O. Rädler , Thomas Franosch

In this work we present a discrete model that captures the fundamental properties of additively manufactured solids in a minimal setting. The model is based on simplified kinematics and allows for the onset of incompatible deformations…

软凝聚态物质 · 物理学 2023-09-26 Davide Renzi , Sonia Marfia , Giuseppe Tomassetti , Giuseppe Zurlo

We study the dynamic properties of a model for wetting with two competing adsorbates on a planar substrate. The two species of particles have identical properties and repel each other. Starting with a flat interface one observes the…

统计力学 · 物理学 2009-04-09 Christian Gogolin , Christian Meltzer , Marvin Willers , Haye Hinrichsen

Growth and shape formation in crowded multicellular assemblies arise from the interplay of chemical gradients, single-cell expansion and mechanical interactions, making it essential to understand how these processes jointly shape collective…

软凝聚态物质 · 物理学 2025-12-02 Ilias-Marios Sarris , Ramin Golestianian , Philip Bittihn

This paper is devoted to investigate the pattern formation of a volume-filling chemotaxis model with logistic cell growth. We first apply the local stability analysis to establish sufficient conditions of destabilization for uniform…

偏微分方程分析 · 数学 2016-11-22 Yazhou Han , Zhongfang Li , Jicheng Tao , Manjun Ma

Advances in experimental techniques and in theoretical models have improved our understanding of protein crystallization. But they have also left open questions regarding the protein phase behavior and self-assembly kinetics, such as why…

软凝聚态物质 · 物理学 2014-03-19 Diana Fusco , Patrick Charbonneau

Understanding the role of solute diffusivities in equilibrium tie-line selection during growth of a second phase in ternary and higher multicomponent two phase alloys is an important problem due to the strong dependence of mechanical…

材料科学 · 物理学 2016-03-31 Arka Lahiri , T. A. Abinandanan , Abhik Choudhury , M. S. Bhaskar

We present a study of dynamical scaling and front motion in a one dimensional system that describes Rayleigh-Benard convection in a rotating cell. We use a model of three competing modes proposed by Busse and Heikes to which spatial…

凝聚态物理 · 物理学 2016-08-31 R. Gallego , M. San Miguel , R. Toral
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