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We present a stochastic epidemic model to study the effect of various preventive measures, such as uniform reduction of contacts and transmission, vaccination, isolation, screening and contact tracing, on a disease outbreak in a…

种群与进化 · 定量生物学 2022-07-08 Martina Favero , Gianpaolo Scalia Tomba , Tom Britton

A generalization of the standard susceptible-infectious-removed (SIR) stochastic model for epidemics in sparse random networks is introduced which incorporates contact tracing in addition to random screening. We propose a deterministic…

适应与自组织系统 · 物理学 2009-11-07 Ramon Huerta , Lev S. Tsimring

We analyze four models of epidemic spreading using a stochastic approach in which the primary stochastic variables are the numbers of individuals in each class. The stochastic approach is described by a master equation and the transition…

统计力学 · 物理学 2020-10-28 Tânia Tomé , Mário J. de Oliveira

Mathematical and computational modeling approaches are increasingly used as quantitative tools in the analysis and forecasting of infectious disease epidemics. The growing need for realism in addressing complex public health questions is…

Contact tracing is one of the most important control measures deployed during epidemics. Relying on the identification of contacts of known infected individuals, it necessitates a network perspective. Although pairwise models have been used…

物理与社会 · 物理学 2026-03-05 Giulia de Meijere , Andrea Pugliese , Gerardo Iñiguez , Péter L. Simon , István Z. Kiss

The duration, type and structure of connections between individuals in real-world populations play a crucial role in how diseases invade and spread. Here, we incorporate the aforementioned heterogeneities into a model by considering a…

物理与社会 · 物理学 2018-04-05 Rosanna C Barnard , Istvan Z Kiss , Luc Berthouze , Joel C Miller

We study contact epidemic models for the spread of infective diseases in finite populations. The size dependence enters in the infection rate. The dynamics of such models is then analyzed within the deterministic approximation, as well as…

种群与进化 · 定量生物学 2020-04-07 Ph. Blanchard , S. Nicolis

In this brief, we study epidemic spreading dynamics taking place in complex networks. We specifically investigate the effect of synergy, where multiple interactions between nodes result in a combined effect larger than the simple sum of…

社会与信息网络 · 计算机科学 2019-04-23 Masaki Ogura , Wenjie Mei , Kenji Sugimoto

We consider a continuous-time Markov chain model of SIR disease dynamics with two levels of mixing. For this so-called stochastic households model, we provide two methods for inferring the model parameters---governing within-household…

种群与进化 · 定量生物学 2018-02-07 James N. Walker , Joshua V. Ross , Andrew J. Black

We combine a pedestrian dynamics model with a contact tracing method to simulate the initial spreading of a highly infectious airborne disease in a confined environment. We focus on a medium size population (up to 1000 people) with a small…

物理与社会 · 物理学 2020-04-22 Krithika Rathinakumar , Annalisa Quaini

The interplay of biological, social, structural and random factors makes disease forecasting extraordinarily complex. The course of an epidemic exhibits average growth dynamics determined by features of the pathogen and the population, yet…

种群与进化 · 定量生物学 2022-02-24 Andrea J. Allen , Mariah C. Boudreau , Nicholas J. Roberts , Antoine Allard , Laurent Hébert-Dufresne

Epidemic control is of great importance for human society. Adjusting interacting partners is an effective individualized control strategy. Intuitively, it is done either by shortening the interaction time between susceptible and infected…

种群与进化 · 定量生物学 2016-12-28 Bin Wu , Shanjun Mao , Jiazeng Wang , Da Zhou

Infectious pathogens often propagate by superspreading, which focusses onward transmission on disproportionately few infected individuals. At the same time, infector-infectee pairs tend to have more similar transmission potentials than…

种群与进化 · 定量生物学 2025-09-22 Noah Silva de Leonardi , Benjamin D. Dalziel

We couple a multi-type stochastic epidemic process with a directed random graph, where edges have random lengths. This random graph representation is used to characterise the fractions of individuals infected by the different types of…

概率论 · 数学 2018-01-29 Tom Britton , Ka Yin Leung , Pieter Trapman

Studies about epidemic modelling have been conducted since before 19th century. Both deterministic and stochastiic model were used to capture the dynamic of infection in the population. The purpose of this project is to investigate the…

种群与进化 · 定量生物学 2018-03-06 Kurnia Susvitasari

The transmission dynamics of an epidemic are rarely homogeneous. Super-spreading events and super-spreading individuals are two types of heterogeneous transmissibility. Inference of super-spreading is commonly carried out on secondary case…

定量方法 · 定量生物学 2025-01-23 Hannah Craddock , Simon EF Spencer , Xavier Didelot

Epidemic disease spreading is conventionally often modelled and analyzed by means of rate and diffusion equations, following the paradigms of well-controlled chemical reactions and diffusive dynamics in a test tube. Yet, serious worries…

物理与社会 · 物理学 2023-01-03 Klaus Kroy

In recent years, it became clear that super-spreader events play an important role, particularly in the spread of airborne infections. We investigate a novel model for super-spreader events, not based on a heterogeneous contact graph but on…

种群与进化 · 定量生物学 2021-04-13 Johannes Müller , Volker Hösel

The role of cooperative effects (i.e. synergy) in transmission of infection is investigated analytically and numerically for epidemics following the rules of Susceptible-Infected-Susceptible (SIS) model defined on random regular graphs.…

物理与社会 · 物理学 2019-04-03 Sergei N. Taraskin , Francisco J. Pérez-Reche

Modeling epidemic dynamics plays an important role in studying how diseases spread, predicting their future course, and designing strategies to control them. In this letter, we introduce a model of SIR (susceptible-infected-removed) type…

种群与进化 · 定量生物学 2013-12-17 Li Chen , Fakhteh Ghanbarnejad , Weiran Cai , Peter Grassberger