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相关论文: Bifurcation of Flux Ratio in Ionic Flows via a PNP…

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Ionic flow carries electrical signals for cells to communicate with each other. The permanent charge of an ion channel is a crucial protein structure for flow properties while boundary conditions play a role of the driving force. Their…

数值分析 · 数学 2021-06-09 Weizhang Huang , Weishi Liu , Yufei Yu

In this paper, we study effects of permanent charges on ion flows through membrane channels via a quasi-one-dimensional classical Poisson-Nernst-Planck system. This system includes three ion species, two cations with different valences and…

软凝聚态物质 · 物理学 2023-12-07 Ning Sun , Weishi Liu

In this research, we explore how permanent charges affect the movement of ionic currents through ion channels. We use a quasi-one-dimensional classical Poisson-Nernst-Planck (PNP) model to study two types of ions, one positively charged and…

动力系统 · 数学 2023-12-29 Hamid Mofidi

We investigate Ussing's unidirectional fluxes and flux ratios of charged tracers motivated particularly by the insightful proposal of Hodgkin and Keynes on a relation between flux ratios and channel structure. Our study is based on analysis…

其他定量生物学 · 定量生物学 2016-12-30 Shuguan Ji , Bob Eisenberg , Weishi Liu

We investigate the effects of the relative dielectric coefficient on ionic flows in open ion channels, using mathematical analysis of reasonably general Poisson-Nernst-Planck type models that can include the finite sizes of ions. The value…

生物大分子 · 定量生物学 2017-10-03 Bob Eisenberg , Weishi Liu

The main goal of this work is to examine the qualitative effect of ion sizes via a steady-state boundary value problem. We study a one-dimensional version of a Poisson-Nernst-Planck system with a local hard-sphere potential model for ionic…

数学物理 · 物理学 2022-03-18 Weishi Liu , Hamid Mofidi

In this work, we examine effects of large permanent charges on ionic flow through ion channels based on a quasi-one dimensional Poisson-Nernst-Planck model. It turns out large positive permanent charges inhibit the flux of cation as…

定量方法 · 定量生物学 2017-12-20 Liwei Zhang , Bob Eisenberg , Weishi Liu

A Poisson-Nernst-Planck-Fermi (PNPF) theory is developed for studying ionic transport through biological ion channels. Our goal is to deal with the finite size of particle using a Fermi like distribution without calculating the forces…

生物物理 · 物理学 2015-06-23 Jinn-Liang Liu , Bob Eisenberg

In this work, the dependence of reversal potentials and zero-current fluxes on diffusion coefficients are examined for ionic flows through membrane channels. The study is conducted for the setup of a simple structure defined by the profile…

软凝聚态物质 · 物理学 2019-12-17 Bob Eisenberg , Weishi Liu , Hamid Mofidi

The flow of ions through permeable channels causes voltage drop in physiological nanodomains such as synapses, dendrites and dendritic spines, and other protrusions. How the voltage changes around channels in these nanodomains has remained…

软凝聚态物质 · 物理学 2025-01-10 Frédéric Paquin-Lefebvre , David Holcman

The Poisson-Nernst-Planck system of equations used to model ionic transport is interpreted as a gradient flow for the Wasserstein distance and a free energy in the space of probability measures with finite second moment. A variational…

偏微分方程分析 · 数学 2015-09-08 David Kinderlehrer , Léonard Monsaingeon , Xiang Xu

In this paper, based on geometric singular perturbation analysis of a quasi-one dimensional Poisson-Nernst-Planck model for ionic flows, we study the problem of zero current condition for ionic flows through membrane channels with a simple…

动力系统 · 数学 2020-09-22 Hamid Mofidi , Weishi Liu

Ion flow in charged nanopores is strongly influenced by the ratio of the Debye length to the pore radius. We investigate the asymptotic behaviour of solutions to the Poisson-Nernst-Planck (PNP) system in narrow pore like geometries and…

偏微分方程分析 · 数学 2019-04-10 B. Matejczyk , J. -F. Pietschmann , G. Richardson , M. -T. Wolfram

The steady-state Poisson-Nernst-Planck (ssPNP) equations are an effective model for the description of ionic transport in ion channels. It is observed that an ion channel exhibits voltage-dependent switching between open and closed states.…

数值分析 · 数学 2017-11-17 Jie Ding , Hui Sun , Zhongming Wang , Shenggao Zhou

A macroscopic model to describe the dynamics of ion transport in ion channels is the Poisson-Nernst-Planck(PNP) equations. In this paper, we develop a finite-difference method for solving PNP equations, which is second-order accurate in…

数值分析 · 数学 2013-03-18 Allen Flavell , Michael Machen , Bob Eisenberg , Chun Liu , Xiaofan Li

We have investigated ion current rectification properties of a recently prepared bipolar nanofluidic diode. This device is based on a single conically shaped nanopore in a polymer film whose pore walls contain a sharp boundary between…

其他凝聚态物理 · 物理学 2009-11-13 D. Constantin , Z. S. Siwy

We consider a plane channel flow of an electrically conducting fluid which is driven by a mean pressure gradient in the presence of an applied magnetic field that is streamwise periodic with zero mean. Magnetic flux expulsion and the…

流体动力学 · 物理学 2015-10-06 Vinodh Bandaru , Julian Pracht , Thomas Boeck , Jörg Schumacher

The molecular mechanism of ion channel gating and substrate modulation is elusive for many voltage gated ion channels, such as eukaryotic sodium ones. The understanding of channel functions is a pressing issue in molecular biophysics and…

生物大分子 · 定量生物学 2016-11-15 Duan Chen , Guowei Wei

In ionic solutions, there are multi-species charged particles (ions) with different properties like mass, charge etc. Macroscopic continuum models like the Poisson-Nernst-Planck (PNP) systems have been extensively used to describe the…

偏微分方程分析 · 数学 2024-08-21 Hao Wu , Tai-Chia Lin , Chun Liu

A discrete rate theory for general multi-ion channels is presented, in which the continuous dynamics of ion diffusion is reduced to transitions between Markovian discrete states. In an open channel, the ion permeation process involves three…

生物物理 · 物理学 2012-06-29 Wan Chen , Radek Erban , S. Jonathan Chapman
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