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Intracellular transport is essential for maintaining proper cellular function in most eukaryotic cells, with perturbations in active transport resulting in several types of disease. Efficient delivery of critical cargos to specific…

生物物理 · 物理学 2016-08-16 David Ando , Nickolay Korabel , Kerwyn Casey Huang , Ajay Gopinathan

Myosin motor proteins drive vigorous steady-state fluctuations in the actin cytoskeleton of cells. Endogenous embedded semiflexible filaments such as microtubules, or added filaments such as single-walled carbon nanotubes are used as novel…

生物物理 · 物理学 2016-06-21 J. Gladrow , N. Fakhri , F. C. MacKintosh , C. F. Schmidt , C. P. Broedersz

We propose a class of microstructurally informed models for the linear elastic mechanical behavior of cross-linked polymer networks such as the actin cytoskeleton. Salient features of the models include the possibility to represent…

其他定量生物学 · 定量生物学 2008-02-27 Ronald Y. Kwon , Adrian J. Lew , Christopher R. Jacobs

We present a statistical mechanical study of stiff polymers, motivated by experiments on actin filaments and the considerable current interest in polymer networks. We obtain simple, approximate analytical forms for the force-extension…

软凝聚态物质 · 物理学 2009-11-13 Abhijit Ghosh , Joseph Samuel , Supurna Sinha

Eukaryotic cells intrinsically change their shape, by changing the composition of their membrane and by restructuring their underlying cytoskeleton. We present here further studies and extensions of a minimal physical model, describing a…

软凝聚态物质 · 物理学 2023-01-31 Yoav Ravid , Samo Penič , Yuko Mimori-Kiyosue , Shiro Suetsugu , Aleš Iglič , Nir S. Gov

Many organisms have an elastic skeleton that consists of a closed shell of epithelial cells that is filled with fluid, and can actively regulate both elastic forces in the shell and hydrostatic pressure inside it. In this work we introduce…

软凝聚态物质 · 物理学 2023-10-13 Ajoy Maji , Yitzhak Rabin

Computer simulations can aid in understanding how collective materials properties emerge from interactions between simple constituents. Here, we introduce a coarse-grained model that enables simulation of networks of actin filaments, myosin…

生物物理 · 物理学 2018-12-07 Simon L. Freedman , Shiladitya Banerjee , Glen M. Hocky , Aaron R. Dinner

The non-linear stress-strain relation for crosslinked polymer networks is studied using molecular dynamics simulations. Previously we demonstrated the importance of trapped entanglements in determining the elastic and relaxational…

软凝聚态物质 · 物理学 2009-10-31 Gary S. Grest , Mathias Puetz , Kurt Kremer , Ralf Everaers

The cytoskeleton provides eukaryotic cells with mechanical support and helps them perform their biological functions. It is a network of semiflexible polar protein filaments and many accessory proteins that bind to these filaments, regulate…

细胞行为 · 定量生物学 2008-01-01 Tanniemola B. Liverpool , M. Cristina Marchetti

We review continuum elastic models for the transmission of both external forces and internal active cellular forces in biopolymer gels, and relate them to recent experiments. Rather than being exhaustive, we focus on continuum elastic…

软凝聚态物质 · 物理学 2022-03-23 Haiqin Wang , Xinpeng Xu

Biofilament-motor protein complexes are ubiquitous in biology and drive the transport of cargo vital for many fundamental cellular processes. As they move, motor proteins exert compressive forces on the filaments to which they are attached,…

生物物理 · 物理学 2024-06-12 Bethany Clarke , Yongyun Hwang , Eric Keaveny

We apply a recently developed model of cytoskeletal force generation to study a cell intrinsic contractility, as well as its response to external loading. The model is based on a non-equilibrium thermodynamic treatment of the…

亚细胞过程 · 定量生物学 2015-06-19 Mirko Maraldi , Clara Valero , Krishna Garikipati

We theoretically investigate the dynamics of a floating lipid bilayer membrane coupled with a two-dimensional cytoskeleton network, taking into explicitly account the intermonolayer friction, the discrete lattice structure of the…

软凝聚态物质 · 物理学 2017-08-02 Ryuichi Okamoto , Shigeyuki Komura , Jean-Baptiste Fournier

Cytoskeletal networks are the main actuators of cellular mechanics, and a foundational example for active matter physics. In cytoskeletal networks, motion is generated on small scales by filaments that push and pull on each other via…

软凝聚态物质 · 物理学 2022-10-05 Sebastian Fürthauer , Michael J. Shelley

Open cellular solids usually possess random microstructures that may contain a characteristic length scale, such as the cell size. This gives rise to size dependent mechanical properties where large systems behave differently from small…

材料科学 · 物理学 2018-01-03 Stefan Liebenstein , Stefan Sandfeld , Michael Zaiser

In this work we present a discrete model that captures the fundamental properties of additively manufactured solids in a minimal setting. The model is based on simplified kinematics and allows for the onset of incompatible deformations…

软凝聚态物质 · 物理学 2023-09-26 Davide Renzi , Sonia Marfia , Giuseppe Tomassetti , Giuseppe Zurlo

The mechanical properties of polymer gels based on cytoskeleton proteins (e.g. actin) have been studied extensively due to their significant role in biological cell motility and in maintaining the cell's structural integrity. Microrheology…

软凝聚态物质 · 物理学 2014-08-22 Adar Sonn-Segev , Anne Bernheim-Groswasser , Yael Roichman

The production of mechanical stresses in living organisms largely relies on localized, force-generating active units embedded in filamentous matrices. Numerical simulations of discrete fiber networks with fixed boundaries have shown that…

生物物理 · 物理学 2018-05-10 Pierre Ronceray , Chase Broedersz , Martin Lenz

The spatial localization or sequestering of motile cargo and their dispersal within cells is an important process in a number of physiological contexts. The morphology of the cytoskeletal network, along which active, motor-driven…

生物物理 · 物理学 2019-07-16 Bryan Maelfeyt , Ajay Gopinathan

Mechanical forces generated by myosin II molecular motors drive diverse cellular processes, most notably shape change, division and locomotion. These forces may be transmitted over long range through the cytoskeletal medium - a disordered,…

软凝聚态物质 · 物理学 2023-02-28 Abhinav Kumar , David A. Quint , Kinjal Dasbiswas