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Based on the theory of stochastic chemical kinetics, the inherent randomness and stochasticity of biochemical reaction networks can be accurately described by discrete-state continuous-time Markov chains. The analysis of such processes is,…

数值分析 · 数学 2014-10-14 Andreychenko Alexander , Mikeev Linar , Wolf Verena

While there has been much interest in adapting conventional clustering procedures---and in higher dimensions, persistent homology methods---to directed networks, little is known about the convergence of such methods. In order to even…

计算几何 · 计算机科学 2022-12-20 Samir Chowdhury , Facundo Mémoli

Many biochemical processes can successfully be described by dynamical systems allowing some form of switching when, depending on their initial conditions, solutions of the dynamical system end up in different regions of state space…

分子网络 · 定量生物学 2011-09-27 Carsten Conradi , Dietrich Flockerzi

Dynamic Bayesian networks (DBNs) are a widely used framework for modeling systems whose probabilistic structure evolves over time. Standard inference methods focus on local conditional distributions and can miss larger-scale patterns in how…

代数拓扑 · 数学 2026-05-13 Will Bales , Carmen Rovi

Hybrid systems with memory refer to dynamical systems exhibiting both hybrid and delay phenomena. While systems of this type are frequently encountered in many physical and engineering systems, particularly in control applications, various…

最优化与控制 · 数学 2017-02-13 Jun Liu , Andrew R. Teel

Interacting systems of events may exhibit cascading behavior where events tend to be temporally clustered. While the cascades themselves may be obvious from the data, it is important to understand which states of the system trigger them.…

In the operation of networked control systems, where multiple processes share a resource-limited and time-varying cost-sensitive network, communication delay is inevitable and primarily influenced by, first, the control systems deploying…

系统与控制 · 电气工程与系统科学 2020-07-16 Mohammad H. Mamduhi , Dipankar Maity , Sandra Hirche , John S. Baras , Karl H. Johansson

This paper identifies a property of delay-robustness in distributed supervisory control of discrete-event systems (DES) with communication delays. In previous work a distributed supervisory control problem has been investigated on the…

系统与控制 · 计算机科学 2017-03-20 Renyuan Zhang , Kai Cai , Yongmei Gan , W. M. Wonham

As the process technologies scale into deep submicron region, crosstalk delay is becoming increasingly severe, especially for global on-chip buses. To cope with this problem, accurate delay models of coupled interconnects are needed. In…

硬件体系结构 · 计算机科学 2013-04-04 Feng Shi , Xuebin Wu , Zhiyuan Yan

This paper revisits building machine learning algorithms that involve interactions between entities, such as those between financial assets in an actively managed portfolio, or interactions between users in a social network. Our goal is to…

机器学习 · 计算机科学 2022-12-05 Qiong Wu , Jian Li , Zhenming Liu , Yanhua Li , Mihai Cucuringu

The use of mathematical methods for the analysis of chemical reaction systems has a very long history, and involves many types of models: deterministic versus stochastic, continuous versus discrete, and homogeneous versus spatially…

分子网络 · 定量生物学 2018-05-29 Polly Y. Yu , Gheorghe Craciun

Connectivity maintenance is crucial for the real world deployment of multi-robot systems, as it ultimately allows the robots to communicate, coordinate and perform tasks in a collaborative way. A connectivity maintenance controller must…

机器人学 · 计算机科学 2021-03-24 Beatrice Capelli , Hassan Fouad , Giovanni Beltrame , Lorenzo Sabattini

Communication delays and multiplexing are ubiquitous features of real-world networked systems. We here introduce a simple model where these two features are simultaneously present, and report the rich phe- nomenology which is actually due…

混沌动力学 · 物理学 2017-04-19 Aradhana Singh , Sarika Jalan , Stefano Boccaletti

In this manuscript, we study the problem of robust synchronization in networks of diffusively time-delayed coupled nonlinear systems. In particular, we prove that, under some mild conditions on the input-output dynamics of the systems and…

系统与控制 · 计算机科学 2017-11-01 Carlos Murguia , Henk Nijmeijer , Justin Ruths

Motivated by recent progress on the interplay between graph theory, dynamics, and systems theory, we revisit the analysis of chemical reaction networks described by mass action kinetics. For reaction networks possessing a thermodynamic…

最优化与控制 · 数学 2012-06-19 Arjan van der Schaft , Shodhan Rao , Bayu Jayawardhana

A novel technique based on machine learning is introduced to reconstruct the decays of highly Lorentz-boosted particles. Using an end-to-end deep learning strategy, the technique bypasses existing rule-based particle reconstruction methods…

高能物理 - 实验 · 物理学 2023-10-04 CMS Collaboration

We consider continuous-time consensus seeking systems whose time-dependent interactions are cut-balanced, in the following sense: if a group of agents influences the remaining ones, the former group is also influenced by the remaining ones…

系统与控制 · 计算机科学 2013-04-29 Julien M. Hendrickx , John N. Tsitsiklis

This paper addresses the challenges of mining latent patterns and modeling contextual dependencies in complex sequence data. A sequence pattern mining algorithm is proposed by integrating Bidirectional Long Short-Term Memory (BiLSTM) with a…

机器学习 · 计算机科学 2025-04-22 Tao Yang , Yu Cheng , Yaokun Ren , Yujia Lou , Minggu Wei , Honghui Xin

Coded caching provides significant gains over conventional uncoded caching by creating multicasting opportunities among distinct requests. Massive multiple-input multiple-output (MIMO) systems require downlink channel state information…

信息论 · 计算机科学 2019-07-08 Qianqian Yang , Mahdi Boloursaz Mashhadi , Deniz Gündüz

Transition states (TSs) are crucial for understanding reaction mechanisms, yet their exploration is limited by the complexity of experimental and computational approaches. Here we propose TS-DFM, a flow matching framework that predicts TSs…

机器学习 · 计算机科学 2025-11-24 Yufei Luo , Xiang Gu , Jian Sun