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Thompson Sampling (TS) is one of the most effective algorithms for solving contextual multi-armed bandit problems. In this paper, we propose a new algorithm, called Neural Thompson Sampling, which adapts deep neural networks for both…

机器学习 · 计算机科学 2022-01-03 Weitong Zhang , Dongruo Zhou , Lihong Li , Quanquan Gu

The increasing size of screening libraries poses a significant challenge for the development of virtual screening methods for drug discovery, necessitating a re-evaluation of traditional approaches in the era of big data. Although 3D…

机器学习 · 计算机科学 2025-03-17 Daniel Rose , Oliver Wieder , Thomas Seidel , Thierry Langer

Maximum Inner Product Search (MIPS) is a ubiquitous task in machine learning applications such as recommendation systems. Given a query vector and $n$ atom vectors in $d$-dimensional space, the goal of MIPS is to find the atom that has the…

机器学习 · 计算机科学 2023-06-28 Mo Tiwari , Ryan Kang , Je-Yong Lee , Donghyun Lee , Chris Piech , Sebastian Thrun , Ilan Shomorony , Martin Jinye Zhang

We propose two linear bandits algorithms with per-step complexity sublinear in the number of arms $K$. The algorithms are designed for applications where the arm set is extremely large and slowly changing. Our key realization is that…

机器学习 · 计算机科学 2022-06-13 Shuo Yang , Tongzheng Ren , Sanjay Shakkottai , Eric Price , Inderjit S. Dhillon , Sujay Sanghavi

Pedigree data contain family history information that is used to analyze hereditary diseases. These clinical data sets may contain duplicate records due to the same family visiting a clinic multiple times or a clinician entering multiple…

应用统计 · 统计学 2021-08-20 Theodore Huang , Matthew Ploenzke , Danielle Braun

The enumeration of chemical graphs is an important topic in cheminformatics and bioinformatics, particularly in the discovery of novel drugs. These graphs are typically either tree-like multigraphs or composed of tree-like multigraphs…

离散数学 · 计算机科学 2025-02-11 Muhammad Ilyas , Seemab Hayat , Naveed Ahmed Azam

Ensembling neural networks is a long-standing technique for improving the generalization error of neural networks by combining networks with orthogonal properties via a committee decision. We show that this technique is an ideal fit for…

机器学习 · 计算机科学 2023-06-12 Shigehiko Schamoni , Michael Hagmann , Stefan Riezler

The concept of personalised medicine in cancer therapy is becoming increasingly important. There already exist drugs administered specifically for patients with tumours presenting well-defined mutations. However, the field is still in its…

生物大分子 · 定量生物学 2024-08-26 Abbi Abdel-Rehim , Oghenejokpeme Orhobor , Gareth Griffiths , Larisa Soldatova , Ross D. King

In Reinforcement Learning (RL), multi-armed Bandit (MAB) problems have found applications across diverse domains such as recommender systems, healthcare, and finance. Traditional MAB algorithms typically assume stationary reward…

人工智能 · 计算机科学 2024-10-10 Gustavo de Freitas Fonseca , Lucas Coelho e Silva , Paulo André Lima de Castro

Motivation: Automatic Anatomical Therapeutic Chemical (ATC) classification is a critical and highly competitive area of research in bioinformatics because of its potential for expediting drug develop-ment and research. Predicting an unknown…

定量方法 · 定量生物学 2021-08-09 Loris Nanni , Alessandra Lumini , Sheryl Brahnam

Personalized medicine, a paradigm of medicine tailored to a patient's characteristics, is an increasingly attractive field in health care. An important goal of personalized medicine is to identify a subgroup of patients, based on baseline…

机器学习 · 统计学 2023-01-31 Hengrui Cai , Wenbin Lu , Rachel Marceau West , Devan V. Mehrotra , Lingkang Huang

Decision-makers often simultaneously face many related but heterogeneous learning problems. For instance, a large retailer may wish to learn product demand at different stores to solve pricing or inventory problems, making it desirable to…

机器学习 · 统计学 2024-07-30 Kan Xu , Hamsa Bastani

Recent years have seen a surge of novel neural network architectures for the integration of multi-omics data for prediction. Most of the architectures include either encoders alone or encoders and decoders, i.e., autoencoders of various…

机器学习 · 计算机科学 2023-02-15 Tony Hauptmann , Stefan Kramer

In this paper we propose a general methodology to derive regret bounds for randomized multi-armed bandit algorithms. It consists in checking a set of sufficient conditions on the sampling probability of each arm and on the family of…

机器学习 · 计算机科学 2024-11-14 Dorian Baudry , Kazuya Suzuki , Junya Honda

An unconstrained nonlinear binary optimization problem of selecting a maximum expected value subset of items is considered. Each item is associated with a profit and probability. Each of the items succeeds or fails independently with the…

计算复杂性 · 计算机科学 2017-06-23 Noam Goldberg , Gabor Rudolf

Preoperative opioid use has been reported to be associated with higher preoperative opioid demand, worse postoperative outcomes, and increased postoperative healthcare utilization and expenditures. Understanding the risk of preoperative…

机器学习 · 计算机科学 2022-05-18 Yuming Sun , Jian Kang , Chad Brummett , Yi Li

Drug-drug interactions (DDIs) are a leading cause of preventable adverse events, often complicating treatment and increasing healthcare costs. At the same time, knowing which drugs do not interact is equally important, as such knowledge…

机器学习 · 计算机科学 2026-01-08 Maryam Abdollahi Shamami , Babak Teimourpour , Farshad Sharifi

Combination therapies have become the standard of care for diseases such as cancer, tuberculosis, malaria and HIV. However, the combinatorial set of available multi-drug treatments creates a challenge in identifying effective combination…

Substance use is a global issue that negatively impacts millions of persons who use drugs (PWUDs). In practice, identifying vulnerable PWUDs for efficient allocation of appropriate resources is challenging due to their complex use patterns…

Tensor parallelism is an essential technique for distributed training of large neural networks. However, automatically determining an optimal tensor parallel strategy is challenging due to the gigantic search space, which grows…

机器学习 · 计算机科学 2025-08-06 Ziji Shi , Le Jiang , Ang Wang , Jie Zhang , Chencan Wu , Yong Li , Xiaokui Xiao , Wei Lin , Jialin Li