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Recently, neural network architectures have been developed to accommodate when the data has the structure of a graph or, more generally, a hypergraph. While useful, graph structures can be potentially limiting. Hypergraph structures in…

代数拓扑 · 数学 2020-12-14 Eric Bunch , Qian You , Glenn Fung , Vikas Singh

The irreducible complexity of natural phenomena has led Graph Neural Networks to be employed as a standard model to perform representation learning tasks on graph-structured data. While their capacity to capture local and global patterns is…

机器学习 · 计算机科学 2024-02-13 Lorenzo Giusti

The language of graph theory, or network science, has proven to be an exceptional tool for addressing myriad problems in neuroscience. Yet, the use of networks is predicated on a critical simplifying assumption: that the quintessential unit…

神经元与认知 · 定量生物学 2016-01-14 Chad Giusti , Robert Ghrist , Danielle S. Bassett

In this paper we introduce a path complex that can be regarded as a generalization of the notion of a simplicial complex. The main motivation for considering path complexes comes from directed graphs(digraphs). We obtain a new notion of the…

组合数学 · 数学 2013-05-14 Alexander Grigor'yan , Yong Lin , Yuri Muranov , Shing-Tung Yau

Graph machine learning methods excel at leveraging pairwise relations present in the data. However, graphs are unable to fully capture the multi-way interactions inherent in many complex systems. An effective way to incorporate them is to…

Random directed acyclic graphs (DAGs) based on imposing an order on Erd\H{o}s-R\'enyi and scale free random graphs are widely used for evaluating causal discovery algorithms. We show that in such DAGs, the set of nodes reachable via open…

统计方法学 · 统计学 2026-05-08 Alexander G. Reisach , Antoine Chambaz , Gilles Blanchard , Sebastian Weichwald

We describe various path homology theories constructed for a directed hypergraph. We introduce the category of directed hypergraphs and the notion of a homotopy in this category. Also, we investigate the functoriality and the homotopy…

代数拓扑 · 数学 2021-09-22 Yuri Muranov , Anna Szczepkowska , Vladimir Vershinin

Constructions of directed configuration graphs based on a given bi-degree distribution were introduced in random graph theory some years ago. These constructions lead to graphs where the degrees of two nodes belonging to the same edge are…

概率论 · 数学 2017-01-13 Philippe Deprez , Mario V. Wüthrich

We prove analogues of classical results for higher homotopy groups and singular homology groups of pseudotopological spaces. Pseudotopological spaces are a generalization of (\v{C}ech) closure spaces which are in turn a generalization of…

代数拓扑 · 数学 2024-09-30 Nikola Milićević , Nicholas A. Scoville

Topological data analysis can reveal higher-order structure beyond pairwise connections between vertices in complex networks. We present a new method based on discrete Morse theory to study topological properties of unweighted and…

离散数学 · 计算机科学 2019-10-01 Harish Kannan , Emil Saucan , Indrava Roy , Areejit Samal

We characterise the quotient surface graphs arising from symmetric contact systems of line segments in the plane and also from symmetric pointed pseudotriangulations in the case where the group of symmetries is generated by a translation or…

组合数学 · 数学 2022-03-22 James Cruickshank , Bernd Schulze

We develop a homology theory for directed spaces, based on the semi-abelian category of (non-unital) associative algebras. The major ingredient is a simplicial algebra constructed from convolution algebras of certain trace categories of a…

代数拓扑 · 数学 2023-05-01 Eric Goubault

We study when co-evolving (or adaptive) higher-order networks defined on directed hypergraphs admit a simplicial description. Binary and triadic couplings are modelled by time-dependent weight tensors. Using representation theory of the…

组合数学 · 数学 2025-12-02 Christian Kuehn , Fergal Murphy

In this work we consider the topological analysis of symbolic formal systems in the framework of network theory. In particular we analyse the network extracted by Principia Mathematica of B. Russell and A.N. Whitehead, where the vertices…

物理与社会 · 物理学 2011-09-09 A. P. Masucci

The application of graph theory to model the complex structure and function of the brain has shed new light on its organization and function, prompting the emergence of network neuroscience. Despite the tremendous progress that has been…

信号处理 · 电气工程与系统科学 2020-09-29 Giulia Lioi , Vincent Gripon , Abdelbasset Brahim , François Rousseau , Nicolas Farrugia

In recent years, Graph Neural Networks (GNNs) have made significant advances in processing structured data. However, most of them primarily adopted a model-centric approach, which simplifies graphs by converting them into undirected formats…

机器学习 · 计算机科学 2024-12-12 Henan Sun , Xunkai Li , Daohan Su , Junyi Han , Rong-Hua Li , Guoren Wang

We study the tailoring of structured random graph ensembles to real networks, with the objective of generating precise and practical mathematical tools for quantifying and comparing network topologies macroscopically, beyond the level of…

无序系统与神经网络 · 物理学 2015-05-13 A. Annibale , A. C. C. Coolen , L. P. Fernandes , F. Fraternali , J. Kleinjung

We present an exact formula for the ordinary generating series of the simple paths between any two vertices of a graph. Our formula involves the adjacency matrix of the connected induced subgraphs and remains valid on weighted and directed…

组合数学 · 数学 2018-10-30 Pierre-Louis Giscard , Paul Rochet

In this paper we introduce a novel family of attributed graphs for the purpose of shape discrimination. Our graphs typically arise from variations on the Mapper graph construction, which is an approximation of the Reeb graph for point cloud…

代数拓扑 · 数学 2023-07-03 Justin Curry , Washington Mio , Tom Needham , Osman Berat Okutan , Florian Russold

In the directed setting, the spaces of directed paths between fixed initial and terminal points are the defining feature for distinguishing different directed spaces. The simplest case is when the space of directed paths is homotopy…