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Unraveling the co-expression of genes across studies enhances the understanding of cellular processes. Inferring gene co-expression networks from transcriptome data presents many challenges, including spurious gene correlations, sample…

机器学习 · 统计学 2024-10-01 Teodora Pandeva , Martijs Jonker , Leendert Hamoen , Joris Mooij , Patrick Forré

The dynamics of contact networks and epidemics of infectious diseases often occur on comparable time scales. Ignoring one of these time scales may provide an incomplete understanding of the population dynamics of the infection process. We…

种群与进化 · 定量生物学 2021-02-09 Luis E C Rocha , Naoki Masuda

Flow networks are essential for both living organisms and enginneered systems. These networks often present complex dynamics controlled, at least in part, by their topology. Previous works have shown that topologically complex networks…

软凝聚态物质 · 物理学 2020-03-24 Miguel Ruiz-Garcia , Eleni Katifori

Characterizing the emergence of chaotic dynamics of complex networks is an essential task in nonlinear science with potential important applications in many fields such as neural control engineering, microgrid technologies, and ecological…

适应与自组织系统 · 物理学 2024-04-29 Ricardo Chacón , Pedro J. Martínez

Multiscale modeling of complex systems is crucial for understanding their intricacies. Data-driven multiscale modeling has emerged as a promising approach to tackle challenges associated with complex systems. On the other hand,…

机器学习 · 计算机科学 2024-03-26 Ruyi Tao , Ningning Tao , Yi-zhuang You , Jiang Zhang

Network science has experienced unprecedented rapid development in the past two decades. The network perspective has also been widely applied to explore various complex systems in great depth. In the first decade, fundamental…

物理与社会 · 物理学 2020-01-13 Aming Li , Yang-Yu Liu

Network coherence generally refers to the emergence of simple aggregated dynamical behaviours, despite heterogeneity in the dynamics of the subsystems that constitute the network. In this paper, we develop a general frequency domain…

系统与控制 · 电气工程与系统科学 2023-02-17 Hancheng Min , Richard Pates , Enrique Mallada

In recent years the research community has accumulated overwhelming evidence for the emergence of complex and heterogeneous connectivity patterns in a wide range of biological and sociotechnical systems. The complex properties of real-world…

Early olfactory pathway responses to the presentation of an odor exhibit remarkably similar dynamical behavior across phyla from insects to mammals, and frequently involve transitions among quiescence, collective network oscillations, and…

神经元与认知 · 定量生物学 2020-09-29 Pamela B Pyzza , Katherine A Newhall , Douglas Zhou , Gregor Kovacic , David Cai

Information spreads across social and technological networks, but often the network structures are hidden from us and we only observe the traces left by the diffusion processes, called cascades. Can we recover the hidden network structures…

社会与信息网络 · 计算机科学 2014-05-14 Hadi Daneshmand , Manuel Gomez-Rodriguez , Le Song , Bernhard Schoelkopf

Recent work in modeling the coupling between disease dynamics and dynamic social network geometry has led to the examination of how human interactions force a rewiring of connections in a population. Rewiring of the network may be…

统计力学 · 物理学 2009-09-29 Leah B. Shaw , Ira B. Schwartz

The problem of quickest detection of dynamic events in networks is studied. At some unknown time, an event occurs, and a number of nodes in the network are affected by the event, in that they undergo a change in the statistics of their…

信号处理 · 电气工程与系统科学 2018-07-18 Shaofeng Zou , Venugopal V. Veeravalli , Jian Li , Don Towsley

In many real-world scenarios, it is nearly impossible to collect explicit social network data. In such cases, whole networks must be inferred from underlying observations. Here, we formulate the problem of inferring latent social networks…

社会与信息网络 · 计算机科学 2010-10-28 Seth A. Myers , Jure Leskovec

As one of the main subjects of investigation in data science, network science has been demonstrated a wide range of applications to real-world networks analysis and modeling. For example, the pervasive presence of structural or topological…

计算机科学中的逻辑 · 计算机科学 2020-09-28 Felipe S. Abrahão , Klaus Wehmuth , Artur Ziviani

The spreading dynamics in social networks are often studied under the assumption that individuals' statuses, whether informed or infected, are fully observable. However, in many real-world situations, such statuses remain unobservable,…

社会与信息网络 · 计算机科学 2026-02-23 Derrick Gilchrist Edward Manoharan , Anubha Goel , Alexandros Iosifidis , Henri Hansen , Juho Kanniainen

Connectivity structure shapes neural computation, but inferring this structure from population recordings is degenerate: multiple connectivity structures can generate identical dynamics. Recent work uses low-rank recurrent neural networks…

神经元与认知 · 定量生物学 2026-03-30 Timothy Doyeon Kim , Ulises Pereira-Obilinovic , Yiliu Wang , Eric Shea-Brown , Uygar Sümbül

Stochasticity and spatial heterogeneity are of great interest recently in studying the spread of an infectious disease. The presented method solves an inverse problem to discover the effectively decisive topology of a heterogeneous network…

人工智能 · 计算机科学 2015-03-13 Yoshiharu Maeno

Many techniques have been developed, such as model compression, to make Deep Neural Networks (DNNs) inference more efficiently. Nevertheless, DNNs still lack excellent run-time dynamic inference capability to enable users trade-off accuracy…

计算机视觉与模式识别 · 计算机科学 2020-09-15 Li Yang , Zhezhi He , Yu Cao , Deliang Fan

Understanding real-world dynamical phenomena remains a challenging task. Across various scientific disciplines, machine learning has advanced as the go-to technology to analyze nonlinear dynamical systems, identify patterns in big data, and…

机器学习 · 计算机科学 2022-12-07 Kevin Linka , Amelie Schafer , Xuhui Meng , Zongren Zou , George Em Karniadakis , Ellen Kuhl

In this work, we investigate a model of an adaptive networked dynamical system, where the coupling strengths among phase oscillators coevolve with the phase states. It is shown that in this model the oscillators can spontaneously…

无序系统与神经网络 · 物理学 2010-11-02 Menghui Li , Shuguang Guan , C. -H. Lai