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Developing reliable methods to discriminate different transient brain states that change over time is a key neuroscientific challenge in brain imaging studies. Topological data analysis (TDA), a novel framework based on algebraic topology,…

神经元与认知 · 定量生物学 2023-12-19 Moo K. Chung , Soumya Das , Hernando Ombao

Topological Data Analysis (TDA) refers to an approach that uses concepts from algebraic topology to study the "shapes" of datasets. The main focus of this paper is persistent homology, a ubiquitous tool in TDA. Basing our study on this, we…

概率论 · 数学 2016-04-15 Takashi Owada

Topological Data Analysis (TDA) has emerged as a powerful framework for extracting robust and interpretable features from noisy high-dimensional data. In the context of Social Choice Theory, where preference profiles and collective…

代数拓扑 · 数学 2025-07-22 Athanasios Andrikopoulos , Nikolaos Sampanis

Topological Data Analysis (TDA) is a recent approach to analyze data sets from the perspective of their topological structure. Its use for time series data has been limited to the field of financial time series primarily and as a method for…

机器学习 · 计算机科学 2019-06-18 Rodrigo Rivera-Castro , Polina Pilyugina , Alexander Pletnev , Ivan Maksimov , Wanyi Wyz , Evgeny Burnaev

Persistence diagrams are one of the main tools in the field of Topological Data Analysis (TDA). They contain fruitful information about the shape of data. The use of machine learning algorithms on the space of persistence diagrams proves to…

计算几何 · 计算机科学 2021-08-10 Yu-Min Chung , Austin Lawson

Inferring topological and geometrical information from data can offer an alternative perspective on machine learning problems. Methods from topological data analysis, e.g., persistent homology, enable us to obtain such information,…

计算机视觉与模式识别 · 计算机科学 2018-02-19 Christoph Hofer , Roland Kwitt , Marc Niethammer , Andreas Uhl

High-quality training data is the foundation of machine learning and artificial intelligence, shaping how models learn and perform. Although much is known about what types of data are effective for training, the impact of the data's…

机器学习 · 计算机科学 2025-10-21 Yang Ba , Mohammad Sadeq Abolhasani , Rong Pan

We investigate topological descriptors for 3D surface analysis, i.e. the classification of surfaces according to their geometric fine structure. On a dataset of high-resolution 3D surface reconstructions we compute persistence diagrams for…

计算机视觉与模式识别 · 计算机科学 2016-01-25 Matthias Zeppelzauer , Bartosz Zieliński , Mateusz Juda , Markus Seidl

Reconstructing models from unorganized point clouds presents a significant challenge, especially when the models consist of multiple components represented by their surface point clouds. Such models often involve point clouds with noise…

计算几何 · 计算机科学 2025-08-26 Yu Chen , Hongwei Lin

We present a new method for the statistical process control of lattice structures using tools from Topological Data Analysis. Motivated by applications in additive manufacturing, such as aerospace components and biomedical implants, where…

统计方法学 · 统计学 2025-10-15 Yulin An , Xueqi Zhao , Enrique del Castillo

Roughness determines many functional properties of surfaces, such as adhesion, friction, and (thermal and electrical) contact conductance. Recent analytical models and simulations enable quantitative prediction of these properties from…

材料科学 · 物理学 2017-01-31 Tevis Jacobs , Till Junge , Lars Pastewka

Recently, deep learning (DL) approaches to vulnerability detection have gained significant traction. These methods demonstrate promising results, often surpassing traditional static code analysis tools in effectiveness. In this study, we…

机器学习 · 计算机科学 2024-10-07 Pavel Snopov , Andrey Nikolaevich Golubinskiy

This paper concerns a theoretical approach that combines topological data analysis (TDA) and sheaf theory. Topological data analysis, a rising field in mathematics and computer science, concerns the shape of the data and has been proven…

计算机视觉与模式识别 · 计算机科学 2020-12-04 Chuan-Shen Hu , Yu-Min Chung

Spatial transcriptomics studies are becoming increasingly large and commonplace, necessitating simultaneous analysis of a large number of spatially resolved variables. Correspondingly, a diverse range of methodologies have been proposed to…

定量方法 · 定量生物学 2025-09-09 James Boyle , Gregory Hamm , Eleanor Williams , Robin JG Hartman , Magnus Soderburg , Ian Henry , Michael Casey

The impressive capabilities of recent generative models to create texts that are challenging to distinguish from the human-written ones can be misused for generating fake news, product reviews, and even abusive content. Despite the…

A time-delay embedding (TDE), grounded in the framework of Takens's Theorem, provides a mechanism to represent and analyze the inherent dynamics of time-series data. Recently, topological data analysis (TDA) methods have been applied to…

统计方法学 · 统计学 2024-10-18 Sixtus Dakurah , Jessi Cisewski-Kehe

Topological data analysis uses tools from topology -- the mathematical area that studies shapes -- to create representations of data. In particular, in persistent homology, one studies one-parameter families of spaces associated with data,…

机器学习 · 计算机科学 2020-12-01 Guido Montúfar , Nina Otter , Yuguang Wang

Persistent homology is a popular computational tool for analyzing the topology of point clouds, such as the presence of loops or voids. However, many real-world datasets with low intrinsic dimensionality reside in an ambient space of much…

机器学习 · 计算机科学 2024-11-01 Sebastian Damrich , Philipp Berens , Dmitry Kobak

Topological data analysis (TDA) uses persistent homology to quantify loops and higher-dimensional holes in data, making it particularly relevant for examining the characteristics of images of cells in the field of cell biology. In the…

统计方法学 · 统计学 2024-05-06 Susan Glenn , Jessi Cisewski-Kehe , Jun Zhu , William M. Bement

Despite the remarkable accuracies attained by machine learning classifiers to separate complex datasets in a supervised fashion, most of their operation falls short to provide an informed intuition about the structure of data, and, what is…

机器学习 · 计算机科学 2023-03-09 Aina Ferrà , Gloria Cecchini , Fritz-Pere Nobbe Fisas , Carles Casacuberta , Ignasi Cos