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The new type of Coronavirus disease called COVID-19 continues to spread quite rapidly. Although it shows some specific symptoms, this disease, which can show different symptoms in almost every individual, has caused hundreds of thousands of…

机器学习 · 计算机科学 2021-03-19 Saban Ozturk , Enes Yigit , Umut Ozkaya

There remains an urgent need to identify existing drugs that might be suitable for treating patients suffering from COVID-19 infection. Drugs rarely act at a single molecular target, with off target effects often being responsible for…

生物大分子 · 定量生物学 2020-09-03 Sakshi Piplani , Puneet Singh , Nikolai Petrovsky , David A. Winkler

The pandemic prevalence of COVID-19 has become a very serious global health issue. Scientists all over the world have been heavily invested in the discovery of a drug to combat SARS-CoV-2. It has been found that RNA-dependent RNA Polymerase…

The identification of protein-ligand interaction plays a key role in biochemical research and drug discovery. Although deep learning has recently shown great promise in discovering new drugs, there remains a gap between deep learning-based…

分子网络 · 定量生物学 2021-08-10 Fan Hu , Lei Wang , Yishen Hu , Dongqi Wang , Weijie Wang , Jianbing Jiang , Nan Li , Peng Yin

Coronavirus disease 2019 (COVID-19) is an ongoing pandemic infectious disease outbreak that has significantly harmed and threatened the health and lives of millions or even billions of people. COVID-19 has also negatively impacted the…

定量方法 · 定量生物学 2020-04-14 Jirong Yi , Raghu Mudumbai , Weiyu Xu

Knowledge graph (KG) is used to represent data in terms of entities and structural relations between the entities. This representation can be used to solve complex problems such as recommendation systems and question answering. In this…

人工智能 · 计算机科学 2022-12-09 Ajay Kumar Gogineni

Identifying mutations of SARS-CoV-2 strains associated with their phenotypic changes is critical for pandemic prediction and prevention. We compared an explainable convolutional neural network (CNN) approach and the traditional genome-wide…

基因组学 · 定量生物学 2025-01-03 Parisa Hatami , Richard Annan , Luis Urias Miranda , Jane Gorman , Mengjun Xie , Letu Qingge , Hong Qin

Coronavirus Disease 2019 (COVID-19) demonstrated the need for accurate and fast diagnosis methods for emergent viral diseases. Soon after the emergence of COVID-19, medical practitioners used X-ray and computed tomography (CT) images of…

图像与视频处理 · 电气工程与系统科学 2021-01-22 Weihan Zhang , Bryan Pogorelsky , Mark Loveland , Trevor Wolf

Coronavirus disease 2019 (COVID-19) is an ongoing global pandemic that has spread rapidly since December 2019. Real-time reverse transcription polymerase chain reaction (rRT-PCR) and chest computed tomography (CT) imaging both play an…

图像与视频处理 · 电气工程与系统科学 2020-12-04 Yifan Jiang , Han Chen , Murray Loew , Hanseok Ko

Knowledge graphs (KGs) are powerful tools that codify relational behaviour between entities in knowledge bases. KGs can simultaneously model many different types of subject-predicate-object and higher-order relations. As such, they offer a…

社会与信息网络 · 计算机科学 2020-10-27 Charilaos I. Kanatsoulis , Nicholas D. Sidiropoulos

Masked graph autoencoder (MGAE) has emerged as a promising self-supervised graph pre-training (SGP) paradigm due to its simplicity and effectiveness. However, existing efforts perform the mask-then-reconstruct operation in the raw data…

机器学习 · 计算机科学 2023-04-07 Wenxuan Tu , Qing Liao , Sihang Zhou , Xin Peng , Chuan Ma , Zhe Liu , Xinwang Liu , Zhiping Cai

Learning interpretable representations of data remains a central challenge in deep learning. When training a deep generative model, the observed data are often associated with certain categorical labels, and, in parallel with learning to…

机器学习 · 计算机科学 2019-10-01 Yifan Xue , Michael Ding , Xinghua Lu

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) causes coronavirus disease 2019 (COVID-19). Imaging tests such as chest X-ray (CXR) and computed tomography (CT) can provide useful information to clinical staff for facilitating…

图像与视频处理 · 电气工程与系统科学 2023-01-11 Lucy Nwosu , Xiangfang Li , Lijun Qian , Seungchan Kim , Xishuang Dong

To better understand the potential of drug repurposing in COVID-19, we analyzed control strategies over essential host factors for SARS-CoV-2 infection. We constructed comprehensive directed protein-protein interaction networks integrating…

Due to the insufficient diagnosis and treatment capabilities at the grassroots level, there are still deficiencies in the early identification and early warning of acute exacerbation of Chronic obstructive pulmonary disease (COPD), often…

机器学习 · 计算机科学 2025-12-23 Leming Zhou , Zuo Wang , Zhigang Liu

COVID-19 has adversely affected humans and societies in different aspects. Numerous people have perished due to inaccurate COVID-19 identification and, consequently, a lack of appropriate medical treatment. Numerous solutions based on…

图像与视频处理 · 电气工程与系统科学 2023-09-06 AmirReza BabaAhmadi , Sahar Khalafi , Masoud ShariatPanahi , Moosa Ayati

Due to the current severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic, there is an urgent need for novel therapies and drugs. We conducted a large-scale virtual screening for small molecules that are potential CoV-2…

Graph convolutional neural networks (GCNs) have shown tremendous promise in addressing data-intensive challenges in recent years. In particular, some attempts have been made to improve predictions of Susceptible-Infected-Recovered (SIR)…

机器学习 · 统计学 2025-01-07 Petr Kisselev , Padmanabhan Seshaiyer

SARS-CoV2, which causes coronavirus disease (COVID-19) is continuing to spread globally and has become a pandemic. People have lost their lives due to the virus and the lack of counter measures in place. Given the increasing caseload and…

Computer-aided diagnosis (CAD) systems stand out as potent aids for physicians in identifying the novel Coronavirus Disease 2019 (COVID-19) through medical imaging modalities. In this paper, we showcase the integration and reliable and fast…

图像与视频处理 · 电气工程与系统科学 2024-03-13 Demetris Gerogiannis , Anastasios Arsenos , Dimitrios Kollias , Dimitris Nikitopoulos , Stefanos Kollias