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Persistent homology is a method for probing topological properties of point clouds and functions. The method involves tracking the birth and death of topological features (2000) as one varies a tuning parameter. Features with short…

Topological data analysis and its main method, persistent homology, provide a toolkit for computing topological information of high-dimensional and noisy data sets. Kernels for one-parameter persistent homology have been established to…

机器学习 · 计算机科学 2019-06-06 René Corbet , Ulderico Fugacci , Michael Kerber , Claudia Landi , Bei Wang

Persistent homology provides information about the lifetime of homology classes along a filtration of cell complexes. Persistence barcode is a graphical representation of such information. A filtration might be determined by time in a set…

计算机视觉与模式识别 · 计算机科学 2018-01-04 Rocio Gonzalez-Diaz , Maria-Jose Jimenez , Belen Medrano

In real-world systems, the relationships and connections between components are highly complex. Real systems are often described as networks, where nodes represent objects in the system and edges represent relationships or connections…

代数拓扑 · 数学 2024-06-24 Shen Zhang

Persistent homology is a topological data analysis tool that has been widely generalized, extending its scope beyond the field of topology. Among its extensions, steady and ranging persistence were developed to study a wide variety of graph…

代数拓扑 · 数学 2026-05-15 Yann-Situ Gazull

As complex networks find applications in a growing range of disciplines, the diversity of naturally occurring and model networks being studied is exploding. The adoption of a well-developed collection of network taxonomies is a natural…

组合数学 · 数学 2016-01-25 Ann Sizemore , Chad Giusti , Danielle Bassett

Persistent homology is a widely used tool in Topological Data Analysis that encodes multiscale topological information as a multi-set of points in the plane called a persistence diagram. It is difficult to apply statistical theory directly…

This paper is a survey of persistent homology, primarily as it is used in topological data analysis. It includes the theory of persistence modules, as well as stability theorems for persistence barcodes, generalized persistence,…

代数拓扑 · 数学 2020-04-03 Gunnar Carlsson

Persistent homology is a popular technique in topological data analysis that tracks the lifespans of homological features in a nested sequence of spaces. This data is typically presented in a multi-set called a persistence diagram or a…

代数拓扑 · 数学 2025-11-26 Deni Salja

The topological classification of gapped band structures depends on the particular definition of topological equivalence. For translation-invariant systems, stable equivalence is defined by a lack of restrictions on the numbers of occupied…

介观与纳米尺度物理 · 物理学 2024-01-29 Piet W. Brouwer , Vatsal Dwivedi

Persistent homology is a powerful mathematical tool that summarizes useful information about the shape of data allowing one to detect persistent topological features while one adjusts the resolution. However, the computation of such…

量子物理 · 物理学 2022-03-01 Bernardo Ameneyro , Vasileios Maroulas , George Siopsis

Observing critical phases in lattice models is challenging due to the need to analyze the finite time or size scaling of observables. We study how the computational topology technique of persistent homology can be used to characterize…

无序系统与神经网络 · 物理学 2022-09-05 Yu He , Shiqi Xia , Dimitris G. Angelakis , Daohong Song , Zhigang Chen , Daniel Leykam

The search for materials with topological properties is an ongoing effort. In this article we propose a systematic statistical method supported by machine learning techniques that is capable of constructing topological models for a generic…

介观与纳米尺度物理 · 物理学 2021-02-18 Thomas Mertz , Roser Valentí

Recently, persistent homology has had tremendous success in biomolecular data analysis. It works by examining the topological relationship or connectivity of a group of atoms in a molecule at a variety of scales, then rendering a family of…

生物大分子 · 定量生物学 2019-03-27 David Bramer , Guo-Wei Wei

A topos theoretic generalisation of the category of sets allows for modelling spaces which vary according to time intervals. Persistent homology, or more generally, persistence is a central tool in topological data analysis, which examines…

环与代数 · 数学 2015-06-23 João Pita Costa , Mikael Vejdemo Johansson , Primož Škraba

Different cell types aggregate and sort into hierarchical architectures during the formation of animal tissues. The resulting spatial organization depends (in part) on the strength of adhesion of one cell type to itself relative to other…

定量方法 · 定量生物学 2023-08-02 Dhananjay Bhaskar , William Y. Zhang , Alexandria Volkening , Björn Sandstede , Ian Y. Wong

Recent years have witnessed an increased interest in the application of persistent homology, a topological tool for data analysis, to machine learning problems. Persistent homology is known for its ability to numerically characterize the…

神经与进化计算 · 计算机科学 2016-08-29 Jen-Yu Liu , Shyh-Kang Jeng , Yi-Hsuan Yang

Persistent homology is an important methodology in topological data analysis which adapts theory from algebraic topology to data settings. Computing persistent homology produces persistence diagrams, which have been successfully used in…

机器学习 · 统计学 2026-01-13 Yueqi Cao , Anthea Monod

This article studies the robust version of persistent homology based on trimming methodology to capture the geometric feature through support of the data in presence of outliers. Precisely speaking, the proposed methodology works when the…

统计方法学 · 统计学 2026-01-01 Tuhin Subhra Mahato , Subhra Sankar Dhar

We apply persistent homology to the task of discovering and characterizing phase transitions, using lattice spin models from statistical physics for working examples. Persistence images provide a useful representation of the homological…

统计力学 · 物理学 2020-12-03 Alex Cole , Gregory J. Loges , Gary Shiu