中文
相关论文

相关论文: Inference of joint conformational distributions fr…

200 篇论文

Assessing the validity of a real-world system with respect to given quality criteria is a common yet costly task in industrial applications due to the vast number of required real-world tests. Validating such systems by means of simulation…

机器学习 · 计算机科学 2024-09-06 David Reeb , Kanil Patel , Karim Barsim , Martin Schiegg , Sebastian Gerwinn

We study the statistical distribution of the closest encounter between generic smooth observations computed along different trajectories of a rapidly mixing dynamical system. At the limit of large trajectories, we obtain a distribution of…

混沌动力学 · 物理学 2022-08-31 Theophile Caby

We extend previously proposed measures of complexity, emergence, and self-organization to continuous distributions using differential entropy. This allows us to calculate the complexity of phenomena for which distributions are known. We…

适应与自组织系统 · 物理学 2016-04-01 Guillermo Santamaría-Bonfil , Nelson Fernández , Carlos Gershenson

In this research, we consider a mixture of genome fragments of a certain bacteria set. The problem of mixture separation is studied under the assumption that all the genomes present in the mixture are completely sequenced or are close to…

基因组学 · 定量生物学 2012-03-12 Valery Kirzhner , Zeev Volkovich

Log-linear models are a family of probability distributions which capture relationships between variables. They have been proven useful in a wide variety of fields such as epidemiology, economics and sociology. The interest in using these…

机器学习 · 计算机科学 2022-12-29 Jan Strappa , Facundo Bromberg

In multicenter biomedical research, integrating data from multiple decentralized sites provides more robust and generalizable findings due to its larger sample size and the ability to account for the between-site heterogeneity. However,…

统计方法学 · 统计学 2025-12-29 Xiaokang Liu , Yuchen Yang , Yifei Sun , Jiang Bian , Yanyuan Ma , Raymond J. Carroll , Yong Chen

Many modern causal questions ask how treatments affect complex outcomes that are measured using wearable devices and sensors. Current analysis approaches require summarizing these data into scalar statistics (e.g., the mean), but these…

机器学习 · 计算机科学 2024-03-22 Srikar Katta , Harsh Parikh , Cynthia Rudin , Alexander Volfovsky

Collaboration among multiple teams has played a major role in probabilistic forecasting events of influenza outbreaks, the COVID-19 pandemic, other disease outbreaks, and in many other fields. When collecting forecasts from individual…

应用统计 · 统计学 2023-10-19 Spencer Wadsworth , Jarad Niemi , Nick Reich

Biomolecular condensates self-assemble when proteins and nucleic acids spontaneously demix to form droplets within the crowded intracellular milieu. This simple mechanism underlies the formation of a wide variety of membraneless…

统计力学 · 物理学 2021-06-30 William M. Jacobs

Conformal predictive systems are sets of predictive distributions with theoretical out-of-sample calibration guarantees. The calibration guarantees are typically that the set of predictions contains a forecast distribution whose prediction…

统计方法学 · 统计学 2025-11-03 Sam Allen , Enrico Pescara , Johanna Ziegel

We consider dynamic versions of the mutual information of lifetime distributions, with focus on past lifetimes, residual lifetimes and mixed lifetimes evaluated at different instants. This allows to study multicomponent systems, by…

概率论 · 数学 2016-05-10 Jafar Ahmadi , Antonio Di Crescenzo , Maria Longobardi

Much of our mechanistic understanding of the functions of biological macromolecules is based on static structural experiments, which can be modelled either as single structures or conformational ensembles. While these provide us with…

生物大分子 · 定量生物学 2025-10-02 Daria Gusew , Carl G. Henning Hansen , Kresten Lindorff-Larsen

Mutual information is widely used, in a descriptive way, to measure the stochastic dependence of categorical random variables. In order to address questions such as the reliability of the descriptive value, one must consider…

机器学习 · 计算机科学 2007-07-13 Marcus Hutter , Marco Zaffalon

An approach that combines Self-Organizing maps, hierarchical clustering and network components is presented, aimed at comparing protein conformational ensembles obtained from multiple Molecular Dynamic simulations. As a first result the…

计算工程、金融与科学 · 计算机科学 2013-10-01 Domenico Fraccalvieri , Laura Bonati , Fabio Stella

We address the problem of automatically acquiring case frame patterns (selectional patterns) from large corpus data. In particular, we propose a method of learning dependencies between case frame slots. We view the problem of learning case…

cmp-lg · 计算机科学 2008-02-03 Hang Li , Naoki Abe

In this paper we use a well know method in statistics, the $\delta$-method, to provide an asymptotic distribution for the Mutual Information, and construct and independence test based on it. Interesting connections are found with the…

统计方法学 · 统计学 2025-02-26 Marius Marinescu , Costel Balcau

In segmentation problems, inference on change-point position and model selection are two difficult issues due to the discrete nature of change-points. In a Bayesian context, we derive exact, non-asymptotic, explicit and tractable formulae…

统计计算 · 统计学 2015-12-31 Guillem Rigaill , Emilie Lebarbier , Stéphane Robin

Analysis of a probabilistic system often requires to learn the joint probability distribution of its random variables. The computation of the exact distribution is usually an exhaustive precise analysis on all executions of the system. To…

信息论 · 计算机科学 2023-07-19 Fabrizio Biondi , Yusuke Kawamoto , Axel Legay , Louis-Marie Traonouez

We provide a computational method for quickly determining the correct distribution of optically active nanoparticles for a desired response. This is achieved by simulating the optical response of single nanoparticles and performing a…

光学 · 物理学 2019-01-03 Phillip Manley , Min Song , Sven Burger , Martina Schmid

Compositional data arise in many areas of research in the natural and biomedical sciences. One prominent example is in the study of the human gut microbiome, where one can measure the relative abundance of many distinct microorganisms in a…

统计方法学 · 统计学 2024-04-26 Aaron J. Molstad , Karl Oskar Ekvall , Piotr M. Suder