相关论文: New upper bounds for trace reconstruction
We improve the lower bound on worst case trace reconstruction from $\Omega\left(\frac{n^{5/4}}{\sqrt{\log n}}\right)$ to $\Omega\left(\frac{n^{3/2}}{\log^{7} n}\right)$. As a consequence, we improve the lower bound on average case trace…
The problem of reconstructing strings from their substring spectra has a long history and in its most simple incarnation asks for determining under which conditions the spectrum uniquely determines the string. We study the problem of coded…
We consider binary infinite order stochastic chains perturbed by a random noise. This means that at each time step, the value assumed by the chain can be randomly and independently flipped with a small fixed probability. We show that the…
In this paper, we study the sample complexity and develop efficient optimal algorithms for 1-bit phase retrieval: recovering a signal $\mathbf{x}\in\mathbb{R}^n$ from $m$ phaseless bits…
A problem of reconstructing words from their subwords involves determining the minimum amount of information needed, such as multisets of scattered subwords of a specific length or the frequency of scattered subwords from a given set, in…
For an undirected tree with $n$ edges labelled by single letters, we consider its substrings, which are labels of the simple paths between pairs of nodes. We prove that there are $O(n^{1.5})$ different palindromic substrings. This solves an…
This paper considers the model problem of reconstructing an object from incomplete frequency samples. Consider a discrete-time signal $f \in \C^N$ and a randomly chosen set of frequencies $\Omega$ of mean size $\tau N$. Is it possible to…
Let $\widetilde{\alpha}$ be a length-$L$ cyclic sequence of characters from a size-$K$ alphabet $\mathcal{A}$ such that the number of occurrences of any length-$m$ string on $\mathcal{A}$ as a substring of $\widetilde{\alpha}$ is $\lfloor L…
For two correlated graphs which are independently sub-sampled from a common Erd\H{o}s-R\'enyi graph $\mathbf{G}(n, p)$, we wish to recover their \emph{latent} vertex matching from the observation of these two graphs \emph{without labels}.…
We consider root-finding algorithms for random rooted trees grown by uniform attachment. Given an unlabeled copy of the tree and a target accuracy $\varepsilon > 0$, such an algorithm outputs a set of nodes that contains the root with…
The problem of signal recovery from the autocorrelation, or equivalently, the magnitudes of the Fourier transform, is of paramount importance in various fields of engineering. In this work, for one-dimensional signals, we give conditions,…
We study the problem of reconstructing a hidden graph given access to a distance oracle. We design randomized algorithms for the following problems: reconstruction of a degree bounded graph with query complexity $\tilde{O}(n^{3/2})$;…
We explain how a slight variant in the use of our recursive algorithm leads to improve the known lower bounds for the absolute trace of a totally positive algebraic integer. We also link the absolute trace of a totally positive algebraic…
Maximal repetition of a string is the maximal length of a repeated substring. This paper investigates maximal repetition of strings drawn from stochastic processes. Strengthening previous results, two new bounds for the almost sure growth…
The cornerstone of any algorithm computing all repetitions in a string of length n in O(n) time is the fact that the number of runs (or maximal repetitions) is O(n). We give a simple proof of this result. As a consequence of our approach,…
We present novel techniques for analyzing the problem of low-rank matrix recovery. The methods are both considerably simpler and more general than previous approaches. It is shown that an unknown (n x n) matrix of rank r can be efficiently…
Motivated by applications such as discovering strong ties in social networks and assembling genome subsequences in biology, we study the problem of recovering a hidden $2k$-nearest neighbor (NN) graph in an $n$-vertex complete graph, whose…
This paper introduces a new family of reconstruction codes which is motivated by applications in DNA data storage and sequencing. In such applications, DNA strands are sequenced by reading some subset of their substrings. While previous…
Motivated by problems from compressed sensing, we determine the threshold behavior of a random $n\times d$ $\pm 1$ matrix $M_{n,d}$ with respect to the property "every $s$ columns are linearly independent". In particular, we show that for…
We consider a range of simply stated dynamic data structure problems on strings. An update changes one symbol in the input and a query asks us to compute some function of the pattern of length $m$ and a substring of a longer text. We give…