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Active matter systems exhibit rich emergent behavior due to constant injection and dissipation of energy at the level of individual agents. Since these systems are far from equilibrium, their dynamics and energetics cannot be understood…

软凝聚态物质 · 物理学 2020-04-23 Sarah Eldeen , Ryan Muoio , Paris Blaisdell-Pijuan , Ngoc La , Mauricio Gomez , Alex Vidal , Wylie Ahmed

For fluctuating currents in non-equilibrium steady states, the recently discovered thermodynamic uncertainty relation expresses a fundamental relation between their variance and the overall entropic cost associated with the driving. We show…

统计力学 · 物理学 2017-07-12 Patrick Pietzonka , Felix Ritort , Udo Seifert

In this work we study the effect of density dependent nonlinear diffusion on pattern formation in the Lengyel--Epstein system. Via the linear stability analysis we determine both the Turing and the Hopf instability boundaries and we show…

斑图形成与孤子 · 物理学 2014-05-20 G. Gambino , M. C. Lombardo , M. Sammartino

Microchannel reactors are critical in biological plus energy-related applications and require meticulous design of hundreds-to-thousands of fluid flow channels. Such systems commonly comprise intricate space-filling microstructures to…

计算工程、金融与科学 · 计算机科学 2019-11-15 Ercan M. Dede , Yuqing Zhou , Tsuyoshi Nomura

Understanding anomalous transport and reaction kinetics due to microscopic physical and chemical disorder is a long-standing goal in many fields including geophysics, biology, and engineering. We consider reaction-diffusion characterized by…

软凝聚态物质 · 物理学 2017-10-11 Gerald J. Lapeyre , Marco Dentz

Stochastic chemical systems with diffusion are modeled with a reaction-diffusion master equation. On a macroscopic level, the governing equation is a reaction-diffusion equation for the averages of the chemical species. On a mesoscopic…

数值分析 · 数学 2009-03-06 Stefan Engblom , Lars Ferm , Andreas Hellander , Per Lötstedt

The behavior of a stationary inverted point mass pendulum pivoted at its lower end in a gravitational potential is studied under the influence of statistical fluctuations. It is shown using purely classical equations that the pendulum…

经典物理 · 物理学 2010-09-29 Abhishodh Prakash

We propose a new non-equilibrium model for spatial pattern formation on the basis of local information transfer. Unlike standard models of pattern formation it is not based on the Turing instability. Information is transmitted through the…

统计力学 · 物理学 2007-05-23 Thimo Rohlf , Stefan Bornholdt

Intrinsic or demographic noise has been shown to play an important role in the dynamics of a variety of systems including predator-prey populations, intracellular biochemical reactions, and oscillatory chemical reaction systems, and is…

统计力学 · 物理学 2013-03-14 C. Michael Giver , Bulbul Chakraborty

Living systems regulate many aspects of their behavior through periodic oscillations of molecular concentrations, which function as `biochemical clocks.' These clocks are intrinsically subject to thermal fluctuations, so that the duration…

生物物理 · 物理学 2020-08-10 Robert Marsland , Wenping Cui , Jordan M. Horowitz

We study numerically the effect of thermal fluctuations and of variable fluid-substrate interactions on the spontaneous dewetting of thin liquid films. To this aim, we use a recently developed lattice Boltzmann method for thin liquid film…

流体动力学 · 物理学 2021-09-08 Stefan Zitz , Andrea Scagliarini , Jens Harting

Reaction-diffusion processes across layered media arise in several scientific domains such as pattern-forming E. coli on agar substrates, epidermal-mesenchymal coupling in development, and symmetry-breaking in cell polarisation. We develop…

Spontaneous pattern formation in homogeneous systems is ubiquitous in nature. Although Turing demonstrated that spatial patterns can emerge in reaction-diffusion (RD) systems when the homogeneous state becomes linearly unstable, it remains…

生物物理 · 物理学 2024-08-20 Shuonan Wu , Bing Yu , Yuhai Tu , Lei Zhang

The stochastic thermodynamics of a dilute, well-stirred mixture of chemically-reacting species is built on the stochastic trajectories of reaction events obtained from the Chemical Master Equation. However, when the molecular populations…

统计力学 · 物理学 2017-07-04 Jordan M. Horowitz

The stochastic efficiency of effusion as a thermal engine is investigated within the framework of stochastic thermodynamics. Explicit results are obtained for the probability distribution of the efficiency both at finite times and in the…

统计力学 · 物理学 2015-02-10 Karel Proesmans , Bart Cleuren , Christian Van Den Broeck

Motivated by systems in which droplets grow and shrink in a turbulence-driven supersaturation field, we investigate the problem of turbulent condensation in a general manner. Using direct numerical simulations we show that the turbulent…

流体动力学 · 物理学 2016-12-06 Christoph Siewert , Jeremie Bec , Giorgio Krstulovic

Diverse physical systems are characterized by their response to small perturbations. Near thermodynamic equilibrium, the fluctuation-dissipation theorem provides a powerful theoretical and experimental tool to determine the nature of…

统计力学 · 物理学 2020-03-25 Jeremy A. Owen , Todd R. Gingrich , Jordan M. Horowitz

In these lecture notes, we explore the mathematical preliminaries and foundational concepts that connect stochastic processes with partial differential equations. We begin by investigating Brownian motion, which serves as a model for random…

概率论 · 数学 2025-09-15 Helder Rojas

Although it is now understood that chaos in complex classical systems is the foundation of thermodynamic behavior, the detailed relations between the microscopic properties of the chaotic dynamics and the macroscopic thermodynamic…

混沌动力学 · 物理学 2015-06-17 Mario Mulansky

A two-variable stochastic model for diffusion-limited nucleation is developed using a formalism derived from fluctuating hydrodynamics. The model is a direct generalization of the standard Classical Nucleation Theory. The nucleation rate…

化学物理 · 物理学 2015-05-26 James F. Lutsko , Miguel A. Durán-Olivencia