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In theoretical ecology, models describing the spatial dispersal and the temporal evolution of species having non-overlapping generations are often based on integrodifference equations. For various such applications the environment has an…

动力系统 · 数学 2022-05-12 Huy Huy , Peter E. Kloeden , Christian Pötzsche

In this monograph, we introduce a new model in population dynamics that describes two species sharing the same environmental resources in a situation of open hostility. The interactions among these populations are described not in terms of…

偏微分方程分析 · 数学 2024-07-30 Elisa Affili , Serena Dipierro , Luca Rossi , Enrico Valdinoci

We investigate a tritrophic system in which organisms' energy depletion, resulting from failed selection attempts, leads to a partial loss of capacity to win the cyclic spatial game. The energy required to maintain optimal organism fitness…

种群与进化 · 定量生物学 2024-06-05 J. Menezes , E. Rangel

How do interactions between species influence their spatial distribution in an ecosystem? To answer this question, we introduce a spatially-extended ecosystem of Generalized Lotka-Volterra type, where species can diffuse and interactions…

统计力学 · 物理学 2025-01-08 Alessandro Salvatore , Fabián Aguirre-López , Ruben Zakine

We study a model of a multi-species ecosystem described by Lotka-Volterra-like equations. Interactions among species form a network whose evolution is determined by the dynamics of the model. Numerical simulations show power-law…

种群与进化 · 定量生物学 2007-05-23 Francois Coppex , Michel Droz , Adam Lipowski

Integrodifference equations are versatile models in theoretical ecology for the spatial dispersal of species evolving in non-overlapping generations. The dynamics of these infinite-dimensional discrete dynamical systems is often illustrated…

动力系统 · 数学 2022-09-07 Christian Pötzsche

The goal of the paper is to derive a revised condition of global equilibrium in complex chemical systems as variational principle in formalism of recently developed discrete thermodynamics (DTD) of chemical equilibria. In classical approach…

化学物理 · 物理学 2010-11-13 B. Zilbergleyt

Noise, through its interaction with the nonlinearity of the living systems, can give rise to counter-intuitive phenomena such as stochastic resonance, noise-delayed extinction, temporal oscillations, and spatial patterns. In this paper we…

种群与进化 · 定量生物学 2007-05-23 B. Spagnolo , D. Valenti , A. Fiasconaro

A model of a device is proposed and related theoretical calculation is performed to study the weak interactions among neutral atoms and molecules. In this model 3-body collisions among the neutral particles occur repeatedly in a trap.…

其他凝聚态物理 · 物理学 2010-01-15 Chengguang Bao

We introduce a model for describing the dynamics of large numbers of interacting cells. The fundamental dynamical variables in the model are sub-cellular elements, which interact with each other through phenomenological intra- and…

定量方法 · 定量生物学 2007-05-23 T. J. Newman

Active systems, from bacterial suspensions to cellular monolayers, are continuously driven out of equilibrium by local injection of energy from their constituent elements and exhibit turbulent-like and chaotic patterns. Here we demonstrate…

软凝聚态物质 · 物理学 2016-02-04 Amin Doostmohammadi , Michael F. Adamer , Sumesh P. Thampi , Julia M. Yeomans

We describe the spectra of certain tridiagonal matrices arising from differential equations commonly used for modeling flocking behavior. In particular we consider systems resulting from allowing an arbitrary boundary condition for the end…

经典分析与常微分方程 · 数学 2014-08-07 J. J. P. Veerman , David K. Hammond

Many of the chemical reactions that take place within a living cell are irreversible. Due to evolutionary pressures, the number of allowable reactions within these systems are highly constrained and thus the resulting metabolic networks…

分子网络 · 定量生物学 2013-03-04 Jonathan J Crofts , Ernesto Estrada

A three level quantum system interacting with nonequilibrium environment is investigated. The stationary state of the system is found (both for non-coherent and coherent environment) and relaxation and decoherence to the stationary state is…

量子物理 · 物理学 2020-08-21 S. V. Kozyrev , A. A. Mironov , A. E. Teretenkov , I. V. Volovich

An ecosystem is a nonlinear dynamical system, its orbits giving rise to the observed complexity in the system. The diverse components of the ecosystem interact in discrete time to give rise to emergent features that determine the trajectory…

动力系统 · 数学 2015-07-29 Sudeepto Bhattacharya , L. M. Saha

Ecological communities are composed of species interactions that respond to environmental fluctuations. Despite increasing evidence of temporal variation in these interactions, most theoretical frameworks remain rooted in static…

We introduce a dissipative particle dynamics scheme for the dynamics of non-ideal fluids. Given a free-energy density that determines the thermodynamics of the system, we derive consistent conservative forces. The use of these effective,…

软凝聚态物质 · 物理学 2009-11-07 I. Pagonabarraga , D. Frenkel

How ecosystems respond to environmental perturbations is a fundamental question in ecology, made especially challenging due to the strong coupling between species and their environment. Here, we introduce a theoretical framework for…

种群与进化 · 定量生物学 2024-11-25 Akshit Goyal , Jason W. Rocks , Pankaj Mehta

In complex systems, the interplay between nonlinear and stochastic dynamics, e.g., J. Monod's necessity and chance, gives rise to an evolutionary process in Darwinian sense, in terms of discrete jumps among attractors, with punctuated…

适应与自组织系统 · 物理学 2013-03-18 Hong Qian

Biological and social systems are structured at multiple scales, and the incentives of individuals who interact in a group may diverge from the collective incentive of the group as a whole. Mechanisms to resolve this tension are responsible…

种群与进化 · 定量生物学 2023-05-31 Daniel B. Cooney , Simon A. Levin , Yoichiro Mori , Joshua B. Plotkin