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Numerical simulations in two space dimensions are used to examine the dynamics, transport, and equilibrium behaviors of a neutrally buoyant circular object immersed in an active suspension within a larger closed circular container. The…

流体动力学 · 物理学 2023-04-12 Jonathan B. Freund

The mechanical properties of polymer gels based on cytoskeleton proteins (e.g. actin) have been studied extensively due to their significant role in biological cell motility and in maintaining the cell's structural integrity. Microrheology…

软凝聚态物质 · 物理学 2014-08-22 Adar Sonn-Segev , Anne Bernheim-Groswasser , Yael Roichman

We develop a model to describe the force generated by the polymerization of an array of parallel biofilaments. The filaments are assumed to be coupled only through mechanical contact with a movable barrier. We calculate the filament density…

统计力学 · 物理学 2015-05-20 K. Tsekouras , D. Lacoste , K. Mallick , J. -F. Joanny

It has been observed experimentally that the actin gel grown from spherical beads coated with polymerization enzymes spontaneously breaks the symmetry of its spherical shape, and yields a ``comet'' pushing the bead forward. We propose a…

Cell motility in higher organisms (eukaryotes) is crucial to biological functions ranging from wound healing to immune response, and also implicated in diseases such as cancer. For cells crawling on hard surfaces, significant insights into…

软凝聚态物质 · 物理学 2015-06-24 E. Tjhung , A. Tiribocchi , D. Marenduzzo , M. E. Cates

We report accelerating diffusive solutions to the diffusion equation with a constant diffusion tensor. The maximum values of the diffusion density evolve in an accelerating fashion described by Airy functions. We show the diffusive…

统计力学 · 物理学 2021-06-29 Felipe A. Asenjo , Sergio A. Hojman

Mounding instability in a conserved growth from vapor is analysed within the framework of adatom kinetics on the growing surface. The analysis shows that depending on the local structure on the surface, kinetics of adatoms may vary, leading…

软凝聚态物质 · 物理学 2009-11-07 S. V. Ghaisas

The cytoskeleton is an active composite of filamentous proteins that dictates diverse mechanical properties and processes in eukaryotic cells by generating forces and autonomously restructuring itself. Enzymatic motors that act on the…

In this paper we address some modelling issues related to biological growth. Our treatment is based on a recently-proposed, general formulation for growth within the context of Mixture Theory (Journal of the Mechanics and Physics of Solids,…

组织与器官 · 定量生物学 2011-11-09 H. Narayanan , E. M. Arruda , K. Grosh , K. Garikipati

Here we characterize the motility of athermal swimming droplets within the framework of active rotational diffusion. Just like active colloids, their trajectories can be modeled with a constant velocity $V$ and a slow angular diffusion, but…

软凝聚态物质 · 物理学 2020-05-20 Adrien Izzet , Pepijn Moerman , Jan Groenewold , Jérôme Bibette , Jasna Brujić

The stability of interfaces and the mechanisms of thin film growth on semiconductors are issues of central importance in electronic devices. These issues can only be understood through detailed study of the relevant microscopic processes.…

mtrl-th · 物理学 2016-09-07 Efthimios Kaxiras

The growth of an actin network against an obstacle that stimulates branching locally is studied using several variants of a kinetic rate model based on the orientation-dependent number density of filaments. The model emphasizes the effects…

生物物理 · 物理学 2009-11-10 A. E. Carlsson

Using an adiabatic approximation method, which searches for Tomlinson model-like instabilities for a simple but still realistic model for two crystalline surfaces in the extremely light contact limit, with mobile molecules present at the…

材料科学 · 物理学 2009-11-07 C. Daly , J. Zhang , J. B. Sokoloff

The effect of a standing acoustic wave on the diffusion of an ad-atom on a crystalline surface is theoretically studied. We used an unidimensional space model to study the ad-atom+substrate system. The dynamic equation of the ad-atom, a…

其他凝聚态物理 · 物理学 2015-06-04 Nicolas Combe , C. Taillan , J. Morillo

We develop and analyze a model for a flat microbial droplet growing on the surface of a three-dimensional viscous fluid. The model describes growth-induced stresses at the fluid surface, density variations in the bulk due to nutrient…

流体动力学 · 物理学 2026-05-20 Vicente Gomez Herrera , Scott Weady

We present a simple three-dimensional model to describe the autonomous expansion of a substrate which grows driven by the local mean curvature of its surface. The model aims to reproduce the nest construction process in arboreal…

适应与自组织系统 · 物理学 2020-02-11 Giulio Facchini , Alexandre Lazarescu , Andrea Perna , Stéphan Douady

In this manuscript, we study a nonlinear model of tumor growth, described by a coupled hyperbolic-elliptic system of partial differential equations. In this model, the compressible flow of tumor cells is modeled by a transport equation for…

偏微分方程分析 · 数学 2025-08-27 Jeffrey Kuan , Konstantina Trivisa

Propulsion by growing actin networks is a universal mechanism used in many different biological systems. Although the core molecular machinery for actin network growth is well preserved in most cases, the geometry of the propelled obstacle…

生物物理 · 物理学 2013-04-16 Julian Weichsel , Ulrich S. Schwarz

Many processes in eukaryotic cells, including cell motility, rely on the growth of branched actin networks from surfaces. Despite its central role the mechano-chemical coupling mechanisms which guide the growth process are poorly…

软凝聚态物质 · 物理学 2015-06-23 Karin John , Denis Caillerie , Chaouqi Misbah

In eukaryotic cell chemotaxis, cells extend and retract transient actin-driven protrusions at their membrane that facilitate both the detection of external chemical gradients and directional movement via the formation of focal adhesions…

细胞行为 · 定量生物学 2025-09-25 Samuel W. S. Johnson , Maddy Parsons , Ruth E. Baker , Philip K. Maini