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A simple model for simulating flows of active suspensions is investigated. The approach is based on dissipative particle dynamics. While the model is potentially applicable to a wide range of self-propelled particle systems, the specific…

流体动力学 · 物理学 2015-10-08 Denis F. Hinz , Alexander Panchenko , Tae-Yeon Kim , Eliot Fried

In this work, we propose a simple yet effective solution to the problem of connectome inference in calcium imaging data. The proposed algorithm consists of two steps. First, processing the raw signals to detect neural peak activities.…

An analytical framework is proposed to describe the elasticity, viscosity and fragility of metallic glasses in relation to their atomic-level structure and the effective interatomic interaction. The bottom-up approach starts with forming an…

软凝聚态物质 · 物理学 2016-08-15 Alexandra E. Lagogianni , Johannes Krausser , Zach Evenson , Konrad Samwer , A Zaccone

We use a biophysical model of a local neuronal circuit to study the implications of synaptic plasticity for the detection of weak sensory stimuli. Networks with fast plastic coupling show behavior consistent with stochastic resonance.…

神经元与认知 · 定量生物学 2009-11-13 Vladislav Volman , Herbert Levine

Two elements of neural information processing have primarily been proposed: firing rate and spike timing of neurons. In the case of synaptic plasticity, although spike-timing-dependent plasticity (STDP) depending on presynaptic and…

神经元与认知 · 定量生物学 2020-01-14 Katsuhiko Hata , Osamu Araki , Osamu Yokoi , Tatsumi Kusakabe , Yoshio Yamamoto , Susumu Ito , Tetsuro Nikuni

Solute trapping is an important phenomenon in rapid solidification of alloys, for which the continuous growth model (CGM) is a popular sharp interface theory. Using matched asymptotic analysis, we show how to quantitatively map the sharp…

材料科学 · 物理学 2018-09-17 Tatu Pinomaa , Nikolas Provatas

Unicellular organisms are open metabolic systems that need to process information about their external environment in order to survive. In most types of tissues and organisms, cells use calcium signaling to carry information from the…

In the mammalian brain newly acquired memories depend on the hippocampus for maintenance and recall, but over time these functions are taken over by the neocortex through a process called systems consolidation. However, reactivation of a…

神经元与认知 · 定量生物学 2019-03-29 Peter Helfer , Thomas R. Shultz

Learning is based on synaptic plasticity, which affects and is driven by neural activity. Because pre- and postsynaptic spiking activity is shaped by randomness, the synaptic weights follow a stochastic process, requiring a probabilistic…

神经元与认知 · 定量生物学 2026-01-14 Jakob Stubenrauch , Naomi Auer , Richard Kempter , Benjamin Lindner

Synaptic plasticity depends on the interaction between electrical activity in neurons and the synaptic proteome, the collection of over 1000 proteins in the post-synaptic density (PSD) of synapses. To construct models of synaptic plasticity…

神经元与认知 · 定量生物学 2014-11-19 David C. Sterratt , Oksana Sorokina , J. Douglas Armstrong

In this work, we propose an asymptotic preserving scheme for a non-linear kinetic reaction-transport equation, in the regime of sharp interface. With a non-linear reaction term of KPP-type, a phenomenon of front propagation has been proved…

数值分析 · 数学 2018-05-23 Hélène Hivert

A fundamental challenge in calcium imaging has been to infer the timing of action potentials from the measured noisy calcium fluorescence traces. We systematically evaluate a range of spike inference algorithms on a large benchmark dataset…

Spike-Timing-Dependent Plasticity (STDP) provides a biologically grounded learning rule for spiking neural networks (SNNs), but its reliance on precise spike timing and pairwise updates limits fast learning of weights. We introduce a…

神经与进化计算 · 计算机科学 2026-01-14 Gouri Lakshmi S , Athira Chandrasekharan , Harshit Kumar , Muhammed Sahad E , Bikas C Das , Saptarshi Bej

Neuromorphic chip refers to an unconventional computing architecture that is modelled on biological brains. It is ideally suited for processing sensory data for intelligence computing, decision-making or context cognition. Despite rapid…

新兴技术 · 计算机科学 2016-09-09 Shuchao Qin , Fengqiu Wang , Yujie Liu , Qing Wan , Xinran Wang , Yongbing Xu , Yi Shi , Xiaomu Wang , Rong Zhang

Traditional neural networks, while powerful, rely on biologically implausible learning mechanisms such as global backpropagation. This paper introduces the Structurally Adaptive Predictive Inference Network (SAPIN), a novel computational…

神经与进化计算 · 计算机科学 2026-02-11 Brennen A. Hill

Sleep is thought to support memory consolidation and the recovery of optimal energetic regime by reorganizing synaptic connectivity, yet how plasticity across hierarchical brain circuits contributes to abstraction and energy efficiency…

This paper proposes a neuronal circuitry layout and synaptic plasticity principles that allow the (pyramidal) neuron to act as a "combinatorial switch". Namely, the neuron learns to be more prone to generate spikes given those combinations…

生物物理 · 物理学 2017-05-09 Marat M. Rvachev

The potential of memristive devices is often seeing in implementing neuromorphic architectures for achieving brain-like computation. However, the designing procedures do not allow for extended manipulation of the material, unlike CMOS…

新兴技术 · 计算机科学 2016-04-25 Shari Lim Wei , Eleni Vasilaki , Ali Khiat , Iulia Salaoru , Radu Berdan , Themistoklis Prodromakis

Amorphous calcium carbonate (ACC) has been widely found in biomineralization, both as a transient precursor and a stable phase, but how organisms accurately control its formation and crystallization pathway remains unclear. Here, we aim to…

We study coherent perfect absorption (CPA) theoretically based on a weakly coupled atom-cavity system with an optically pumped second-order nonlinear crystal (SOC) embedded in the cavity. Our system does not require a strong coupling, which…

量子物理 · 物理学 2020-06-19 Wei Xiong , Jiaojiao Chen , Baolong Fang , Chi-Hang Lam , J. Q. You