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Research on the localization of the genetic basis associated with diseases or traits has been widely conducted in the last a few decades. Scan methods have been developed for region-based analysis in whole-genome association studies,…

统计方法学 · 统计学 2024-10-31 Wei Zhang , Fan Wang , Fang Yao

We propose the molecular omics network (MOOMIN) a multimodal graph neural network used by AstraZeneca oncologists to predict the synergy of drug combinations for cancer treatment. Our model learns drug representations at multiple scales…

机器学习 · 计算机科学 2022-08-09 Benedek Rozemberczki , Anna Gogleva , Sebastian Nilsson , Gavin Edwards , Andriy Nikolov , Eliseo Papa

The prediction plays the important role in detecting efficient protection and therapy of cancer. The prediction of mutations in gene needs a diagnostic and classification, which is based on the whole database (big dataset), to reach…

机器学习 · 计算机科学 2016-08-10 Ayad Ghany Ismaeel , Dina Yousif Mikhail

Identifying the mutations that drive cancer growth is key in clinical decision making and precision oncology. As driver mutations confer selective advantage and thus have an increased likelihood of occurrence, frequency-based statistical…

基因组学 · 定量生物学 2021-05-04 Adnan Akbar , Andrey Solovyev , John W Cassidy , Nirmesh Patel , Harry W Clifford

Background: The concept of combinatorial biomarkers was conceived around 2010: it was noticed that simple biomarkers are often inadequate for recognizing and characterizing complex diseases. Methods: Here we present an algorithmic search…

神经元与认知 · 定量生物学 2013-12-09 Balazs Szalkai , Vince K. Grolmusz , Vince I. Grolmusz , Coalition Against Major Diseases

Precision medicine is a paradigm shift in healthcare relying heavily on genomics data. However, the complexity of biological interactions, the large number of genes as well as the lack of comparisons on the analysis of data, remain a…

Early tumor detection is key in reducing the number of breast cancer death and screening mammography is one of the most widely available and reliable method for early detection. However, it is difficult for the radiologist to process with…

计算机视觉与模式识别 · 计算机科学 2013-08-13 José M. Celaya-Padilla , Juan Rodriguez-Rojas , Victor Trevino , José G. Gerardo Tamez-Pena

Cancer grading is an essential task in pathology. The recent developments of artificial neural networks in computational pathology have shown that these methods hold great potential for improving the accuracy and quality of cancer…

计算机视觉与模式识别 · 计算机科学 2023-07-27 Jaeung Lee , Keunho Byeon , Jin Tae Kwak

Traditional breast cancer imaging methods using microwave Nearfield Radar Imaging (NRI) seek to recover the complex permittivity of the tissues at each voxel in the imaging region. This approach is suboptimal, in that it does not directly…

计算机视觉与模式识别 · 计算机科学 2016-11-01 Richard Obermeier , Jose Angel Martinez-Lorenzo

Magnetic Resonance Imaging (MRI) is widely used for screening and staging prostate cancer. However, many prostate cancers have subtle features which are not easily identifiable on MRI, resulting in missed diagnoses and alarming variability…

Genomic alterations lead to cancer complexity and form a major hurdle for a comprehensive understanding of the molecular mechanisms underlying oncogenesis. In this review, we describe the recent advances in studying cancer-associated genes…

分子网络 · 定量生物学 2007-12-24 Edwin Wang , Anne Lenferink , Maureen O'Connor-McCourt

Molecular phenotyping is central in cancer precision medicine, but remains costly and standard methods only provide a tumour average profile. Microscopic morphological patterns observable in histopathology sections from tumours are…

图像与视频处理 · 电气工程与系统科学 2020-09-21 Yinxi Wang , Kimmo Kartasalo , Masi Valkonen , Christer Larsson , Pekka Ruusuvuori , Johan Hartman , Mattias Rantalainen

Accurate detection of brain tumors could save lots of lives and increasing the accuracy of this binary classification even as much as a few percent has high importance. Neural Gas Networks (NGN) is a fast, unsupervised algorithm that could…

图像与视频处理 · 电气工程与系统科学 2023-01-31 S. Muhammad Hossein Mousavi

Computational discovery of microRNAs (miRNA) is based on pre-determined sets of features from miRNA precursors (pre-miRNA). These feature sets used by current tools for pre-miRNA recognition differ in construction and dimension. Some…

定量方法 · 定量生物学 2014-03-19 Ivani de O. N. Lopes , Alexander Schliep , André P. L. F. de Carvalho

Breast cancer is one of the leading causes of cancer-related mortality in women, and early detection is essential for improving outcomes. Magnetic resonance imaging (MRI) is a highly sensitive tool for breast cancer detection, particularly…

计算机视觉与模式识别 · 计算机科学 2025-08-29 Smriti Joshi , Lidia Garrucho , Richard Osuala , Oliver Diaz , Karim Lekadir

Breast cancer (BC) stands as one of the most common malignancies affecting women worldwide, necessitating advancements in diagnostic methodologies for better clinical outcomes. This article provides a comprehensive exploration of the…

人工智能 · 计算机科学 2025-12-11 Samita Bai , Sidra Nasir , Rizwan Ahmed Khan , Alexandre Meyer , Hubert Konik

Cervical cancer, the fourth leading cause of cancer in women globally, requires early detection through Pap smear tests to identify precancerous changes and prevent disease progression. In this study, we performed a focused analysis by…

图像与视频处理 · 电气工程与系统科学 2025-05-22 Abdul Samad Shaik , Shashaank Mattur Aswatha , Rahul Jashvantbhai Pandya

Traditional breast cancer image classification methods require manual extraction of features from medical images, which not only require professional medical knowledge, but also have problems such as time-consuming and labor-intensive and…

图像与视频处理 · 电气工程与系统科学 2021-04-26 Mengfan Li

The GPCALMA (Grid Platform for Computer Assisted Library for MAmmography) collaboration involves several departments of physics, INFN sections, and italian hospitals. The aim of this collaboration is developing a tool that can help…

International initiatives such as METABRIC (Molecular Taxonomy of Breast Cancer International Consortium) have collected several multigenomic and clinical data sets to identify the undergoing molecular processes taking place throughout the…

机器学习 · 计算机科学 2022-11-29 Teodora Reu