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We describe the structure of the graphs with the smallest average distance and the largest average clustering given their order and size. There is usually a unique graph with the largest average clustering, which at the same time has the…

分子网络 · 定量生物学 2010-07-28 Dionysios Barmpoutis , Richard M. Murray

Graphs have often been used to answer questions about the interaction between real-world entities by taking advantage of their capacity to represent complex topologies. Complex networks are known to be graphs that capture such non-trivial…

机器学习 · 计算机科学 2022-06-03 Gabriel Spadon , Jose F. Rodrigues-Jr

Network or graph structures are ubiquitous in the study of complex systems. Often, we are interested in complexity trends of these system as it evolves under some dynamic. An example might be looking at the complexity of a food web as…

信息论 · 计算机科学 2007-07-16 Russell K. Standish

Graph similarity metrics serve far-ranging purposes across many domains in data science. As graph datasets grow in size, scientists need comparative tools that capture meaningful differences, yet are lightweight and scalable. Graph Relative…

组合数学 · 数学 2019-08-08 Sinan G. Aksoy , Kathleen E. Nowak , Stephen J. Young

Comparative analysis of scalar fields is an important problem with various applications including feature-directed visualization and feature tracking in time-varying data. Comparing topological structures that are abstract and succinct…

图形学 · 计算机科学 2024-06-06 Raghavendra Sridharamurthy , Vijay Natarajan

The topology of many real complex networks has been conjectured to be embedded in hidden metric spaces, where distances between nodes encode their likelihood of being connected. Besides of providing a natural geometrical interpretation of…

物理与社会 · 物理学 2017-01-23 Antoine Allard , M. Ángeles Serrano , Guillermo García-Pérez , Marián Boguñá

Various approaches and measures from network analysis have been applied to granular and particulate networks to gain insights into their structural, transport, failure-propagation and other systems-level properties. In this article, we…

软凝聚态物质 · 物理学 2019-11-06 Silvia Nauer , Lucas Böttcher , Mason A. Porter

Given a set $\Omega$ and a proximity function $\phi: \Omega \times \Omega \to \mathbb R^+$, we define a new metric for $\Omega$ by considering a path distance in $\Omega$, that is considered as a complete graph. We analyze the properties of…

社会与信息网络 · 计算机科学 2019-05-21 J. M. Calabuig , H. Falciani , A. Ferrer-Sapena , L. M. García-Raffi , E. A. Sánchez-Pérez

We propose a novel method for topological analysis of unweighted graphs which is based on \textit{persistent homology}. The proposed method maps the input graph to a complete weighted graph where the weighting function maps each edge to a…

代数拓扑 · 数学 2020-07-31 Padraig Corcoran

Many real life networks present an average path length logarithmic with the number of nodes and a degree distribution which follows a power law. Often these networks have also a modular and self-similar structure and, in some cases -…

统计力学 · 物理学 2009-02-26 Alicia Miralles , Lichao Chen , Zhongzhi Zhang , Francesc Comellas

The emergence of geometric deep learning as a novel framework to deal with graph-based representations has faded away traditional approaches in favor of completely new methodologies. In this paper, we propose a new framework able to combine…

计算机视觉与模式识别 · 计算机科学 2020-08-19 Pau Riba , Andreas Fischer , Josep Lladós , Alicia Fornés

Recent development of network structure analysis shows that it plays an important role in characterizing complex system of many branches of sciences. Different from previous network centrality measures, this paper proposes the notion of…

信息检索 · 计算机科学 2009-02-12 Hai Zhuge , Junsheng Zhang

Modeling and generating graphs is fundamental for studying networks in biology, engineering, and social sciences. However, modeling complex distributions over graphs and then efficiently sampling from these distributions is challenging due…

机器学习 · 计算机科学 2018-06-26 Jiaxuan You , Rex Ying , Xiang Ren , William L. Hamilton , Jure Leskovec

In this paper we study self-similar and fractal networks from the combinatorial perspective. We establish analogues of topological (Lebesgue) and fractal (Hausdorff) dimensions for graphs and demonstrate that they are naturally related to…

组合数学 · 数学 2019-12-25 Pavel Skums , Leonid Bunimovich

We study the question of reconstructing a weighted, directed network up to isomorphism from its motifs. In order to tackle this question we first relax the usual (strong) notion of graph isomorphism to obtain a relaxation that we call weak…

离散数学 · 计算机科学 2022-12-20 Samir Chowdhury , Facundo Mémoli

Inferring network topology from dynamical observations is a fundamental problem pervading research on complex systems. Here, we present a simple, direct method to infer the structural connection topology of a network, given an observation…

混沌动力学 · 物理学 2015-05-19 Srinivas Gorur Shandilya , Marc Timme

Graph matching finds the correspondence of nodes across two correlated graphs and lies at the core of many applications. When graph side information is not available, the node correspondence is estimated on the sole basis of network…

机器学习 · 计算机科学 2022-02-08 Weijie Liu , Chao Zhang , Nenggan Zheng , Hui Qian

Community structure is of paramount importance for the understanding of complex networks. Consequently, there is a tremendous effort in order to develop efficient community detection algorithms. Unfortunately, the issue of a fair assessment…

社会与信息网络 · 计算机科学 2017-11-28 Jebabli Malek , Cherifi Hocine , Cherifi Chantal , Hamouda Atef

Recent genomic and bioinformatic advances have motivated the development of numerous random network models purporting to describe graphs of biological, technological, and sociological origin. The success of a model has been evaluated by how…

Almost all statistical and machine learning methods in analyzing brain networks rely on distances and loss functions, which are mostly Euclidean or matrix norms. The Euclidean or matrix distances may fail to capture underlying subtle…

计算几何 · 计算机科学 2021-02-18 Moo K. Chung , Alexander Smith , Gary Shiu