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We propose an algorithm for optimizations in which the gradients contain stochastic noise. This arises, for example, in structural optimizations when computations of forces and stresses rely on methods involving Monte Carlo sampling, such…

材料科学 · 物理学 2022-11-30 Siyuan Chen , Shiwei Zhang

AI algorithms have proven to be excellent predictors of protein structure, but whether and how much these algorithms can capture the underlying physics remains an open question. Here, we aim to test this question using the Alphafold2 (AF)…

生物大分子 · 定量生物学 2024-07-22 John M Mcbride , Tsvi Tlusty

The accurate prediction of solid-solid structural phase transitions at finite temperature is a challenging task, since the dynamics is so slow that direct simulations of the phase transitions by first-principles (FP) methods are typically…

材料科学 · 物理学 2021-05-25 Peitao Liu , Carla Verdi , Ferenc Karsai , Georg Kresse

The influence of microscopic force fields on the motion of Brownian particles plays a fundamental role in a broad range of fields, including soft matter, biophysics, and active matter. Often, the experimental calibration of these force…

计算物理 · 物理学 2020-06-17 Aykut Argun , Tobias Thalheim , Stefano Bo , Frank Cichos , Giovanni Volpe

Fast prediction of the synthesizability conditions of materials remains challenging, even assuming synthesis under thermodynamic equilibrium. Approaches solely based on convex stability hulls neglect finite-temperature effects, while…

材料科学 · 物理学 2026-05-27 Finja Tadge , Javier Sanz Rodrigo , Andrea Crovetto

The determination of quartic force fields for use in vibrational second-order perturbation (VPT2) calculations, currently available in numerous electronic structure packages, becomes very expensive as the size of the molecule increases,…

化学物理 · 物理学 2026-04-23 Saikiran Kotaru , Chen Qu , Apurba Nandi , Paul L. Houston , Joel M. Bowman

Stiffness estimation is crucial for delicate object manipulation in robotic and prosthetic hands but remains challenging due to dependence on force and displacement measurement and real-time sensory integration. This study presents a…

机器人学 · 计算机科学 2025-07-22 Anway S. Pimpalkar , Ariel Slepyan , Nitish V. Thakor

Metallic foams are crucial to many emerging applications, among them shielding against hypervelocity impacts caused by micrometeoroids and orbital debris. The variability of properties at feature-scale and mesoscale lengths originating from…

Evaluating the mechanical response of fiber-reinforced composites can be extremely time consuming and expensive. Machine learning (ML) techniques offer a means for faster predictions via models trained on existing input-output pairs and…

材料科学 · 物理学 2024-10-03 Yixuan Sun , Imad Hanhan , Michael D. Sangid , Guang Lin

Machine learning force fields (MLFFs) are an attractive alternative to ab-initio methods for molecular dynamics (MD) simulations. However, they can produce unstable simulations, limiting their ability to model phenomena occurring over…

机器学习 · 计算机科学 2025-02-26 Sanjeev Raja , Ishan Amin , Fabian Pedregosa , Aditi S. Krishnapriyan

We introduce machine learning models of quantum mechanical observables of atoms in molecules. Instant out-of-sample predictions for proton and carbon nuclear chemical shifts, atomic core level excitations, and forces on atoms reach…

化学物理 · 物理学 2015-08-26 Matthias Rupp , Raghunathan Ramakrishnan , O. Anatole von Lilienfeld

We present a proof of concept that machine learning techniques can be used to predict the properties of CNOHF energetic molecules from their molecular structures. We focus on a small but diverse dataset consisting of 109 molecular…

材料科学 · 物理学 2018-06-14 Daniel C. Elton , Zois Boukouvalas , Mark S. Butrico , Mark D. Fuge , Peter W. Chung

First-principles based crystal structure prediction (CSP) methods have revealed an essential tool for the discovery of new materials. However, in solids close to displacive phase transitions, which are common in ferroelectrics,…

材料科学 · 物理学 2026-04-17 Hao Gao , Yue-Wen Fang , Ion Errea

Structural stability and vibrational properties of KN$_3$ have been studied under pressure using the first principles calculations based on the density functional theory (DFT) as well as with semi empirical dispersion correction to the DFT…

材料科学 · 物理学 2013-11-08 K. Ramesh Babu , G. Vaitheeswaran

First-principles based modeling on phonon dynamics and transport using density functional theory and Boltzmann transport equation has proven powerful in predicting thermal conductivity of crystalline materials, but it remains unfeasible for…

材料科学 · 物理学 2019-07-23 Xin Qian , Shenyou Peng , Xiaobo Li , Yujie Wei , Ronggui Yang

The computational prediction of atomistic structure is a long-standing problem in physics, chemistry, materials, and biology. Within conventional force-field or {\em ab initio} calculations, structure is determined through energy…

化学物理 · 物理学 2021-09-15 Dominik Lemm , Guido Falk von Rudorff , O. Anatole von Lilienfeld

It was recently demonstrated that two machine-learning architectures, reservoir computing and time-delayed feed-forward neural networks, can be exploited for detecting the Earth's anomaly magnetic field immersed in overwhelming complex…

信号处理 · 电气工程与系统科学 2024-05-30 Mohammadamin Moradi , Zheng-Meng Zhai , Aaron Nielsen , Ying-Cheng Lai

Predicting and interpreting thermal performance under oscillating flow in porous structures remains a critical challenge due to the complex coupling between fluid dynamics and geometric features. This study introduces a data-driven…

流体动力学 · 物理学 2025-09-16 Lichang Zhu , Laura Schaefer , Leitao Chen , Ben Xu

The native structures of proteins, except for notable exceptions of intrinsically disordered proteins, in general take their most stable conformation in the physiological condition to maintain their structural framework so that their…

生物大分子 · 定量生物学 2021-10-26 Lyman Monroe , Daisuke Kihara

We study vibrational statistics in current-carrying model molecular junctions using master equation approach. Especially, we concentrate on the validity of using an effective temperature $T_{\rm eff}$ to characterize the nonequilibrium…

介观与纳米尺度物理 · 物理学 2020-08-20 Tao Wang , Lei-Lei Nian , Jing-Tao Lü