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With the widespread success of deep learning in biomedical image segmentation, domain shift becomes a critical and challenging problem, as the gap between two domains can severely affect model performance when deployed to unseen data with…

计算机视觉与模式识别 · 计算机科学 2021-03-04 Ping Gong , Wenwen Yu , Qiuwen Sun , Ruohan Zhao , Junfeng Hu

CA has grown as potential classifier for addressing major problems in bioinformatics. Lot of bioinformatics problems like predicting the protein coding region, finding the promoter region, predicting the structure of protein and many other…

计算工程、金融与科学 · 计算机科学 2014-01-13 Pokkuluri Kiran Sree , Inampudi Ramesh Babu , SSSN Usha Devi Nedunuri

X-ray reflectivity and fluorescence near total reflection experiments were performed to examine the affinities of divalent ions ($\mathrm{Ca^{2+}}$ and $\mathrm{Ba^{2+}}$) from aqueous solution to a charged phosphatidic-acid (PA) surface. A…

软凝聚态物质 · 物理学 2009-01-20 Wei Bu , Kevin Flores , Jacob Pleasants , David Vaknin

Cell adhesion complexes (CACs), which are activated by ligand binding, play key roles in many cellular functions ranging from cell cycle regulation to mediation of cell extracellular matrix adhesion. Inspired by single molecule pulling…

生物大分子 · 定量生物学 2018-04-04 Ngo Min Toan , D. Thirumalai

The use of amyloid-beta (A$\beta$) clearance to support regulatory approvals of drugs in Alzheimer's disease (AD) remains controversial. We evaluate A$\beta$ as a potential trial-level surrogate endpoint for clinical function in AD using a…

Soluble alpha-amylases play an important role in the catabolism of polysaccharides. In this work, we show that the enzyme can interact with the lipid membrane and further alter its mechanical properties. Vesicle fluctuation spectroscopy is…

Principal Component analysis (PCA) is a useful statistical technique that is commonly used for multivariate analysis of correlated variables. It is usually applied as a dimension reduction method: the top principal components (PCs)…

The diagnosis of prostate cancer is challenging due to the heterogeneity of its presentations, leading to the over diagnosis and treatment of non-clinically important disease. Accurate diagnosis can directly benefit a patient's quality of…

Recent experimental evidence suggests that acute myeloid leukemias may originate from multiple clones of malignant cells. Nevertheless it is not known how the observed clones may differ with respect to cell properties such as proliferation…

组织与器官 · 定量生物学 2014-10-07 Thomas Stiehl , Natalia Baran , Anthony D. Ho , Anna Marciniak-Czochra

Biochemical recurrence (BCR) after radical prostatectomy (RP) is a surrogate marker for aggressive prostate cancer with adverse outcomes, yet current prognostic tools remain imprecise. We trained an AI-based model on diagnostic prostate…

Our motivation stems from current medical research aiming at personalized treatment using a molecular-based approach. The broad goal is to develop a more precise and targeted decision making process, relative to traditional treatments based…

统计方法学 · 统计学 2022-01-27 Federico Castelletti , Guido Consonni

The encapsulation of polyanions, whether single-stranded RNAs or synthetic polymers, is primarily driven by attractive electrostatic interactions between the positively charged, structurally disordered RNA-binding domains of virus coat…

生物物理 · 物理学 2025-01-24 Mohammadamin Safdari , Siyu Li , Sanaz Panahandeh , Paul van der Schoot , Roya Zandi

The pathogenesis and progression of many tumors, including hematologic malignancies is highly dependent on enhanced lipogenesis. De novo fatty-acid synthesis permits accelerated proliferation of tumor cells by providing structural…

组织与器官 · 定量生物学 2016-12-04 Christian Thiede , Gerhard Ehninger , Kai Simons , Michal Grzybek , Adam Stefanko

Surface modification of poly(L-lactide) (L-PLA) and polycaprolactone (PCL) bioresorbable polymers by radio-frequency thermal glow discharge plasma is reported. Improved biocompatibility of L-PLA and PCL materials was obtained by employing…

Meta-analysis of multiple genome-wide association studies (GWAS) is effective for detecting single or multi marker associations with complex traits. We develop a flexible procedure ("STAMP") based on mixture models to perform region based…

统计方法学 · 统计学 2018-01-01 Andriy Derkach , Ruth M. Pfeiffer

X-ray observations of active galactic nuclei (AGNs) reveal relativistic reflections from the innermost regions of accretion disks, which contain general-relativistic footprints caused by spinning supermassive black holes (SMBH). We…

高能天体物理现象 · 物理学 2024-10-28 A. Danehkar

We demonstrate that the interplay of in-plane biaxial and uniaxial anisotropy fields in (Ga,Mn)As results in a magnetization reorientation transition and an anisotropic AC susceptibility which is fully consistent with a simple single domain…

材料科学 · 物理学 2007-05-23 K-Y. Wang , M. Sawicki , K. W. Edmonds , R. P. Campion , S. Maat , C. T. Foxon , B. L. Gallagher , T. Dietl

Lung cancer remains a leading cause of cancer-related deaths globally, with non-small cell lung cancer (NSCLC) being the most common subtype. This study aimed to identify key biomarkers associated with stage III NSCLC in non-smoking females…

基因组学 · 定量生物学 2024-09-02 Huili Zheng , Qimin Zhang , Yiru Gong , Zheyan Liu , Shaohan Chen

Machine learning in medical imaging during clinical routine is impaired by changes in scanner protocols, hardware, or policies resulting in a heterogeneous set of acquisition settings. When training a deep learning model on an initial…

计算机视觉与模式识别 · 计算机科学 2022-03-16 Matthias Perkonigg , Johannes Hofmanninger , Christian Herold , Helmut Prosch , Georg Langs

The macromechanical properties of purely bundled in vitro actin networks are not only determined by the micromechanical properties of individual bundles but also by molecular unbinding events of the actin binding protein (ABP) fascin. Under…

软凝聚态物质 · 物理学 2009-11-13 Oliver Lieleg , Andreas R. Bausch