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We consider a simple thermodynamically consistent model that captures the self-organized chemomechanical coupling resulting from the interplay between autocatalytically reacting surfactants, the Marangoni effect and wetting dynamics. An…

软凝聚态物质 · 物理学 2025-09-18 Florian Voss , Uwe Thiele

The collective behavior of chemically propelled sphere-dimer motors made from linked catalytic and noncatalytic spheres in a quasi-two-dimensional confined geometry is studied using a coarse-grained microscopic dynamical model. Chemical…

软凝聚态物质 · 物理学 2019-01-09 Peter H. Colberg , Raymond Kapral

Here we demonstrate a synthetic micro-engine, based on long-range controlled movement of colloidal particles, which is induced by a local catalytic reaction. The directed motion at long timescales was achieved by placing specially designed…

统计力学 · 物理学 2008-07-16 Larysa Baraban , Christian Kreidler , Denys Makarov , Paul Leiderer , Artur Erbe

Motile microorganisms, like bacteria and algae, unify abilities like self-propulsion, autonomous navigation, and decision-making on the micron scale. While recent breakthroughs have led to the creation of synthetic microswimmers and…

软凝聚态物质 · 物理学 2026-02-06 Aritra K. Mukhopadhyay , Ran Niu , Linhui Fu , Kai Feng , Christopher Fujta , Qiang Zhao , Jinping Qu , Benno Liebchen

In this paper we examine boundary effects in a fractional chemotactic equation derived from a kinetic transport model describing cell movement in response to chemical gradients (chemotaxis). Specifically, we analyze reflecting boundary…

偏微分方程分析 · 数学 2025-06-05 Gissell Estrada-Rodriguez , Heiko Gimperlein

Biological functions in each animal cell depend on coordinated operations of a wide variety of molecular motors. Some of the these motors transport cargo to their respective destinations whereas some others are mobile workshops which…

生物物理 · 物理学 2008-03-07 Debashish Chowdhury

Micro-organisms aggregate through chemotaxis against a concentration gradient of signals secreted by themselves. We have numerically studied a model consisting of elements with intracellular dynamics, random walks with a state-dependent…

统计力学 · 物理学 2007-10-31 Masayo Inoue , Kunihiko Kaneko

The possibility to guide and control magnetic nanoparticles in a non-invasive manner has spawned various applications in biotechnology such as targeted drug delivery and sensing of biological substances. These applications are facilitated…

新兴技术 · 计算机科学 2019-02-05 Wayan Wicke , Arman Ahmadzadeh , Vahid Jamali , Harald Unterweger , Christoph Alexiou , Robert Schober

We investigate the behavior of colloidal suspensions with different volume fractions confined between parallel walls under a range of steady shears. We model the particles using molecular dynamics (MD) with full hydrodynamic interactions…

软凝聚态物质 · 物理学 2014-09-18 Frances E. Mackay , Kyle Pastor , Mikko Karttunen , Colin Denniston

Molecular dynamics simulations at a constant electric potential are an essential tool to study electrochemical processes, providing microscopic information on the structural, thermodynamic, and dynamical properties. Despite the numerous…

Various biological system models have been proposed in systems biology, which are based on the complex biological reactions kinetic of various components. These models are not practical because we lack of kinetic information. In this paper,…

定量方法 · 定量生物学 2011-02-19 Weidong Huang , Chundu Wu , Bingjia Xiao , Weidong Xia

Molecular motor proteins form the basis of cellular dynamics. Recently, notable efforts have led to the creation of their DNA-based mimics, which can carry out complex nanoscale motion. However, such functional analogues have not yet been…

We construct a class of quantum stochastic models of reservoir driven many-particle systems that are the natural counterparts of certain extensively studied classical ones, which have been shown to exhibit good hydrodynamical behaviour. Our…

数学物理 · 物理学 2009-11-11 Geoffrey Sewell

Multicellular chemotaxis can occur via individually chemotaxing cells that are mechanically coupled. Alternatively, it can emerge collectively, from cells chemotaxing differently in a group than they would individually. Here we consider…

生物物理 · 物理学 2017-11-01 Julien Varennes , Sean Fancher , Bumsoo Han , Andrew Mugler

Many processes in biology involve both reactions and chemotaxis. However, to the best of our knowledge, the question of interaction between chemotaxis and reactions has not yet been addressed either analytically or numerically. We consider…

偏微分方程分析 · 数学 2011-04-05 Alexander Kiselev , Lenya Ryzhik

Colonies of bacteria grown on thin agar plate exhibit fractal patterns as a result of adaptation to their environments. The bacterial colony pattern formation is regulated crucially by chemotaxis, the movement of cells along a chemical…

生物物理 · 物理学 2013-05-24 Waipot Ngamsaad , Kannika Khompurngson

The dynamics of colloidal particles in potential energy landscapes have mainly been investigated theoretically. In contrast, here we discuss the experimental realization of potential energy landscapes with the help of light fields and the…

We propose a continuum model for pattern formation, based on the multiphase model framework, to explore in vitro cell patterning within an extracellular matrix. We demonstrate that, within this framework, chemotaxis-driven cell migration…

细胞行为 · 定量生物学 2022-11-21 Georgina Al-Badri , James B. Phillips , Rebecca J. Shipley , Nicholas C. Ovenden

An important component in studying mathematical models in many biochemical systems, such as those found in developmental biology, is phase transition. The purpose of this work is to analyze the phase transition property of a…

偏微分方程分析 · 数学 2013-12-19 Masoud Yari

Continuum models of active nematic gels have proved successful to describe a number of biological systems consisting of a population of rodlike motile subunits in a fluid environment. However, in order to get a thorough understanding of the…

软凝聚态物质 · 物理学 2023-05-03 Stefano Turzi
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