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Measuring geometric similarity between high-dimensional network representations is a topic of longstanding interest to neuroscience and deep learning. Although many methods have been proposed, only a few works have rigorously analyzed their…

机器学习 · 统计学 2023-12-12 Dean A. Pospisil , Brett W. Larsen , Sarah E. Harvey , Alex H. Williams

Accurate segmentation of tubular and curvilinear structures, such as blood vessels, neurons, and road networks, is crucial in various applications. A key challenge is ensuring topological correctness while maintaining computational…

图像与视频处理 · 电气工程与系统科学 2025-03-21 Siyi Wu , Leyi Zhao , Haotian Ma , Xinyuan Song

Redundancy needs more precise characterization as it is a major factor in the evolution and robustness of networks of multivariate interactions. We investigate the complexity of such interactions by inferring a connection transitivity that…

社会与信息网络 · 计算机科学 2021-10-25 Tiago Simas , Rion Brattig Correia , Luis M. Rocha

Starting with a similarity function between objects, it is possible to define a distance metric on pairs of objects, and more generally on probability distributions over them. These distance metrics have a deep basis in functional analysis,…

计算几何 · 计算机科学 2011-03-15 Sarang Joshi , Raj Varma Kommaraju , Jeff M. Phillips , Suresh Venkatasubramanian

Human brain connectome studies aim at extracting and analyzing relevant features associated to pathologies of interest. Usually this consists in modeling the brain connectome as a graph and in using graph metrics as features. A fine brain…

In many real world datasets arising from social networks, there are hidden higher order relations among data points which cannot be captured using graph modeling. It is natural to use a more general notion of hypergraphs to model such…

机器学习 · 计算机科学 2020-10-05 Dong Quan Ngoc Nguyen , Lin Xing

One of the central challenges facing modern neuroscience is to explain the ability of the nervous system to coherently integrate information across distinct functional modules in the absence of a central executive. To this end Tononi et al.…

神经元与认知 · 定量生物学 2010-11-30 L. Barnett , C. L. Buckley , S. Bullock

In many real-world applications data come as discrete metric spaces sampled around 1-dimensional filamentary structures that can be seen as metric graphs. In this paper we address the metric reconstruction problem of such filamentary…

计算几何 · 计算机科学 2013-05-07 Frédéric Chazal , Jian Sun

Data-driven brain parcellations aim to provide a more accurate representation of an individual's functional connectivity, since they are able to capture individual variability that arises due to development or disease. This renders…

神经元与认知 · 定量生物学 2017-03-30 Sofia Ira Ktena , Salim Arslan , Sarah Parisot , Daniel Rueckert

We introduce the tree distance, a new distance measure on graphs. The tree distance can be computed in polynomial time with standard methods from convex optimization. It is based on the notion of fractional isomorphism, a characterization…

离散数学 · 计算机科学 2021-04-30 Jan Böker

An important operation in geometry processing is finding the correspondences between pairs of shapes. The Gromov-Hausdorff distance, a measure of dissimilarity between metric spaces, has been found to be highly useful for nonrigid shape…

计算机视觉与模式识别 · 计算机科学 2013-11-25 Alon Shtern , Ron Kimmel

While many approaches to make neural networks more fathomable have been proposed, they are restricted to interrogating the network with input data. Measures for characterizing and monitoring structural properties, however, have not been…

In many applications, it is needed to change the topology of a tensor network directly and without approximation. This work will introduce a general scheme that satisfies these needs. We will describe the procedure by two examples and show…

数值分析 · 数学 2012-03-08 Stefan Handschuh

Graph Neural Networks (GNNs) have been highly successful for the node classification task. GNNs typically assume graphs are homophilic, i.e. neighboring nodes are likely to belong to the same class. However, a number of real-world graphs…

机器学习 · 计算机科学 2024-09-20 Yurui Lai , Taiyan Zhang , Rui Fan

This paper extends the possibility to examine the underlying curvature of data through the lens of topology by using the Betti curves, tools of Persistent Homology, as key topological descriptors, building on the clique topology approach.…

代数拓扑 · 数学 2024-06-25 Luigi Caputi , Anna Pidnebesna , Jaroslav Hlinka

Network complexity has been studied for over half a century and has found a wide range of applications. Many methods have been developed to characterize and estimate the complexity of networks. However, there has been little research with…

机器学习 · 统计学 2021-01-13 Yann Issartel

As network research becomes more sophisticated, it is more common than ever for researchers to find themselves not studying a single network but needing to analyze sets of networks. An important task when working with sets of networks is…

社会与信息网络 · 计算机科学 2019-07-26 James P. Bagrow , Erik M. Bollt

This paper proposes a new graph proximity measure. This measure is a derivative of network reliability. By analyzing its properties and comparing it against other proximity measures through graph examples, we demonstrate that it is more…

社会与信息网络 · 计算机科学 2016-12-23 Haifeng Qian , Hui Wan , Mark N. Wegman , Luis A. Lastras , Ruchir Puri

One important question in neuroscience is how global behavior in a brain network emerges from the interplay between network connectivity and the neural dynamics of individual nodes. To better understand this theoretical relationship, we…

神经元与认知 · 定量生物学 2022-09-13 Anca Radulescu , Johan Nakuci , Simone Evans , Sarah Muldoon

An information theoretic approach inspired by quantum statistical mechanics was recently proposed as a means to optimize network models and to assess their likelihood against synthetic and real-world networks. Importantly, this method does…

统计力学 · 物理学 2018-09-12 Carlo Nicolini , Vladimir Vlasov , Angelo Bifone