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The integration of deep learning approaches in biomedical research has been transformative, enabling breakthroughs in various applications. Despite these strides, its application in protein inference is impeded by the scarcity of…

机器学习 · 计算机科学 2026-05-07 Zheng Ma , Jiazhen Chen , Lei Xin , Ali Ghodsi

Dynamic text-attributed graphs (DyTAGs) are prevalent in various real-world scenarios, where each node and edge are associated with text descriptions, and both the graph structure and text descriptions evolve over time. Despite their broad…

人工智能 · 计算机科学 2024-11-05 Jiasheng Zhang , Jialin Chen , Menglin Yang , Aosong Feng , Shuang Liang , Jie Shao , Rex Ying

The rich information underlying graphs has inspired further investigation of unsupervised graph representation. Existing studies mainly depend on node features and topological properties within static graphs to create self-supervised…

机器学习 · 计算机科学 2026-05-27 Yiming Xu , Zhen Peng , Bin Shi , Xu Hua , Bo Dong

Graphs are commonly used to characterise interactions between objects of interest. Because they are based on a straightforward formalism, they are used in many scientific fields from computer science to historical sciences. In this paper,…

机器学习 · 统计学 2015-06-24 Pierre Latouche , Fabrice Rossi

The independence gap of a graph was introduced by Ekim et al. (2018) as a measure of how far a graph is from being well-covered. It is defined as the difference between the maximum and minimum size of a maximal independent set. We…

组合数学 · 数学 2018-12-14 Tınaz Ekim , Didem Gözüpek , Ademir Hujdurović , Martin Milanič

An interval t-coloring of a graph G is a proper edge-coloring of G with colors 1,2,...,t such that at least one edge of G is colored by i, i=1,2,...,t, and the edges incident to each vertex v\in V(G) are colored by d_{G}(v) consecutive…

离散数学 · 计算机科学 2012-02-02 Petros A. Petrosyan , Hrant H. Khachatrian , Liana E. Yepremyan , Hovhannes G. Tananyan

A vertebrate interval graph is an interval graph in which the maximum size of a set of independent vertices equals the number of maximal cliques. For any fixed $v \ge 1$, there is a polynomial-time algorithm for deciding whether a…

组合数学 · 数学 2021-09-28 Rain Jiang , Kai Jiang , Minghui Jiang

Many real world networks are considered temporal networks, in which the chronological ordering of the edges has importance to the meaning of the data. Performing temporal subgraph matching on such graphs requires the edges in the subgraphs…

数据结构与算法 · 计算机科学 2018-01-25 Patrick Mackey , Katherine Porterfield , Erin Fitzhenry , Sutanay Choudhury , George Chin

Temporal graphs are commonly used to represent time-resolved relations between entities in many natural and artificial systems. Many techniques were devised to investigate the evolution of temporal graphs by comparing their state at…

社会与信息网络 · 计算机科学 2024-11-20 Lorenzo Dall'Amico , Alain Barrat , Ciro Cattuto

Vertex connectivity and edge connectivity are fundamental concepts in graph theory that have been widely studied from both structural and algorithmic perspectives. The focus of this paper is on computing these two parameters for graphs…

数据结构与算法 · 计算机科学 2025-10-14 Therese Biedl , Prosenjit Bose , Karthik Murali

Naor, Parter, and Yogev [SODA 2020] recently designed a compiler for automatically translating standard centralized interactive protocols to distributed interactive protocols, as introduced by Kol, Oshman, and Saxena [PODC 2018]. In…

分布式、并行与集群计算 · 计算机科学 2020-07-17 Laurent Feuilloley , Pierre Fraigniaud , Pedro Montealegre , Ivan Rapaport , Éric Rémila , Ioan Todinca

Graph-based models form a fundamental aspect of data representation in Data Sciences and play a key role in modeling complex networked systems. In particular, recently there is an ever-increasing interest in modeling dynamic complex…

数据结构与算法 · 计算机科学 2015-09-18 Klaus Wehmuth , Artur Ziviani , Eric Fleury

A 2-stab unit interval graph (2SUIG) is an axes-parallel unit square intersection graph where the unit squares intersect either of the two fixed lines parallel to the $X$-axis, distance $1 + \epsilon$ ($0 < \epsilon < 1$) apart. This family…

离散数学 · 计算机科学 2016-04-01 Sujoy Kumar Bhore , Dibyayan Chakraborty , Sandip Das , Sagnik Sen

The class of closed graphs by a linear ordering on their sets of vertices is investigated. A recent characterization of such a class of graphs is analyzed by using tools from the proper interval graph theory.

组合数学 · 数学 2015-09-23 Marilena Crupi

In recent years several compressed indexes based on variants of the Burrows-Wheeler transformation have been introduced. Some of these index structures far more complex than a single string, as was originally done with the FM-index…

计算复杂性 · 计算机科学 2019-02-27 Daniel Gibney , Sharma V. Thankachan

Inferring spatial-temporal properties from data is important for many complex systems, such as additive manufacturing systems, swarm robotic systems and biological networks. Such systems can often be modeled as a labeled graph where labels…

计算机科学中的逻辑 · 计算机科学 2019-03-26 Zhe Xu , Alexander J Nettekoven , A. Agung Julius , Ufuk Topcu

Hamiltonian cycles in graphs were first studied in the 1850s. Since then, an impressive amount of research has been dedicated to identifying classes of graphs that allow Hamiltonian cycles, and to related questions. The corresponding…

离散数学 · 计算机科学 2023-06-22 Isolde Adler , Noleen Köhler

There has been an increasing interest in modeling continuous-time dynamics of temporal graph data. Previous methods encode time-evolving relational information into a low-dimensional representation by specifying discrete layers of neural…

机器学习 · 计算机科学 2022-06-01 Jin Guo , Zhen Han , Zhou Su , Jiliang Li , Volker Tresp , Yuyi Wang

In this work we consider temporal graphs, i.e. graphs, each edge of which is assigned a set of discrete time-labels drawn from a set of integers. The labels of an edge indicate the discrete moments in time at which the edge is available. We…

数据结构与算法 · 计算机科学 2013-10-30 Paul G. Spirakis , Eleni Ch. Akrida

An edge-coloring of a graph $G$ with colors $1,...,t$ is an interval $t$-coloring if all colors are used, and the colors of edges incident to each vertex of $G$ are distinct and form an interval of integers. A graph $G$ is interval…

组合数学 · 数学 2012-02-02 Petros A. Petrosyan , Hrant H. Khachatrian , Hovhannes G. Tananyan