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Long-time series of neuronal recordings are resulting from the activity of connected neuronal networks. Yet how neuronal properties can be extracted remains empirical. We review here the data analysis based on network models to recover…

神经元与认知 · 定量生物学 2024-11-04 Lou Zonca , Elena Dossi , Nathalie Rouach , D. Holcman

The segmentation of satellite images is a necessary step to perform object-oriented image classification, which has become relevant due to its applicability on images with a high spatial resolution. To perform object-oriented image…

图像与视频处理 · 电气工程与系统科学 2018-01-18 Wuilan Torres , Antonio Rueda-Toicen

Automated and semi-automated techniques in biomedical electron microscopy (EM) enable the acquisition of large datasets at a high rate. Segmentation methods are therefore essential to analyze and interpret these large volumes of data, which…

计算机视觉与模式识别 · 计算机科学 2023-08-08 Anusha Aswath , Ahmad Alsahaf , Ben N. G. Giepmans , George Azzopardi

Image segmentation is a central topic in image processing and computer vision and a key issue in many applications, e.g., in medical imaging, microscopy, document analysis and remote sensing. According to the human perception, image…

数值分析 · 数学 2022-06-24 Laura Antonelli , Valentina De Simone , Daniela di Serafino

Segmentation of images holds an important position in the area of image processing. It becomes more important whi le typically dealing with medical images where presurgery and post surgery decisions are required for the purpose of…

计算机视觉与模式识别 · 计算机科学 2010-05-25 Mrigank Rajya , Sonal Rewri , Swati Sheoran

Reconstruction of neuroanatomy is a fundamental problem in neuroscience. Stochastic expression of colors in individual cells is a promising tool, although its use in the nervous system has been limited due to various sources of variability…

神经元与认知 · 定量生物学 2017-01-24 Uygar Sümbül , Douglas Roussien , Fei Chen , Nicholas Barry , Edward S. Boyden , Dawen Cai , John P. Cunningham , Liam Paninski

Stem cells, through their ability to produce daughter stem cells and differentiate into specialized cells, are essential in the growth, maintenance, and repair of biological tissues. Understanding the dynamics of cell populations in the…

应用统计 · 统计学 2026-02-02 Huyen Nguyen , Haim Bar , Zhiyi Chi , Vladimir Pozdnyakov

We propose a novel abstraction of the image segmentation task in the form of a combinatorial optimization problem that we call the multi-separator problem. Feasible solutions indicate for every pixel whether it belongs to a segment or a…

计算机视觉与模式识别 · 计算机科学 2023-07-11 Jannik Irmai , Shengxian Zhao , Jannik Presberger , Bjoern Andres

We propose a new iterative segmentation model which can be accurately learned from a small dataset. A common approach is to train a model to directly segment an image, requiring a large collection of manually annotated images to capture the…

计算机视觉与模式识别 · 计算机科学 2018-09-13 Danielle F. Pace , Adrian V. Dalca , Tom Brosch , Tal Geva , Andrew J. Powell , Jürgen Weese , Mehdi H. Moghari , Polina Golland

Investigation of cell structure is hardly imaginable without bright-field microscopy. Numerous modifications such as depth-wise scanning or videoenhancement make this method being state-of-the-art. This raises a question what maximal…

图像与视频处理 · 电气工程与系统科学 2020-10-29 Kirill Lonhus , Renata Rychtarikova , Ganna Platonova , Dalibor Stys

Image segmentation is the process of partitioning the image into significant regions easier to analyze. Nowadays, segmentation has become a necessity in many practical medical imaging methods as locating tumors and diseases. Hidden Markov…

计算机视觉与模式识别 · 计算机科学 2018-03-14 EL-Hachemi Guerrout , Samy Ait-Aoudia , Dominique Michelucci , Ramdane Mahiou

Image segmentation has many applications which range from machine learning to medical diagnosis. In this paper, we propose a framework for the segmentation of images based on super-pixels and algorithms for community identification in…

计算机视觉与模式识别 · 计算机科学 2016-12-13 Oscar A. C. Linares , Glenda Michele Botelho , Francisco Aparecido Rodrigues , João Batista Neto

We apply the cell merging method to a model shallow water problem with a permeable boundary. We use a cut cell approach which is more easily and systematically scalable with different shapes of boundaries. The novel cell merging method…

数值分析 · 数学 2021-12-20 Chanyang Ryoo , Kyle Mandli

When applying automatic analysis of fluorescence or histopathological images of cells, it is necessary to partition, or de-clump, partially overlapping cell nuclei. In this work, I describe a method of partitioning partially overlapping…

计算机视觉与模式识别 · 计算机科学 2018-04-13 James Kapaldo

Accurately segmenting and individualizing cells in SEM images is a highly promising technique for elucidating tissue architecture in oncology. While current AI-based methods are effective, errors persist, necessitating time-consuming manual…

图像与视频处理 · 电气工程与系统科学 2025-04-11 Florian Robert , Alexia Calovoulos , Laurent Facq , Fanny Decoeur , Etienne Gontier , Christophe F. Grosset , Baudouin Denis de Senneville

Precision agriculture is area with lack of cheap technology. The refinement of the production system brings large advantages to the producer and the use of images makes the monitoring a more cheap methodology. Macronutrients monitoring can…

神经与进化计算 · 计算机科学 2014-03-13 Maicon A. Sartin , Alexandre C. R. da Silva

In this paper we propose a novel deep learning-based algorithm for biomedical image segmentation which uses a sequential attention mechanism able to shift the focus of attention across the image in a selective way, allowing subareas which…

计算机视觉与模式识别 · 计算机科学 2019-09-30 Shohei Hayashi , Bisser Raytchev , Toru Tamaki , Kazufumi Kaneda

Image segmentation in RGB space is a notoriously difficult task where state-of-the-art methods are trained on thousands or even millions of annotated images. While the performance is impressive, it is still not perfect. We propose a novel…

计算机视觉与模式识别 · 计算机科学 2024-11-12 Moritz Heep , Eduard Zell

This survey gives an overview over different techniques used for pixel-level semantic segmentation. Metrics and datasets for the evaluation of segmentation algorithms and traditional approaches for segmentation such as unsupervised methods,…

计算机视觉与模式识别 · 计算机科学 2016-05-13 Martin Thoma

Tracking of plant cells in images obtained by microscope is a challenging problem due to biological phenomena such as large number of cells, non-uniform growth of different layers of the tightly packed plant cells and cell division.…

计算机视觉与模式识别 · 计算机科学 2023-09-22 Md Shazid Islam , Arindam Dutta , Calvin-Khang Ta , Kevin Rodriguez , Christian Michael , Mark Alber , G. Venugopala Reddy , Amit K. Roy-Chowdhury