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A $k$-motif (or graphlet) is a subgraph on $k$ nodes in a graph or network. Counting of motifs in complex networks has been a well-studied problem in network analysis of various real-word graphs arising from the study of social networks and…

社会与信息网络 · 计算机科学 2020-04-02 Taha Sevim , Muhammet Selçuk Güvel , Lale Özkahya

The identification and counting of small graph patterns, called network motifs, is a fundamental primitive in the analysis of networks, with application in various domains, from social networks to neuroscience. Several techniques have been…

社会与信息网络 · 计算机科学 2021-01-19 Ilie Sarpe , Fabio Vandin

The problem of calculating the frequencies of network motifs on three and four nodes in large networks is considered. Telecommunications networks, cell molecular networks are investigated. The sizes of the investigated networks are hundreds…

社会与信息网络 · 计算机科学 2020-01-08 M. N. Yudina , V. N. Zadorozhnyi , E. B. Yudin

We address the problem of computing the distribution of induced connected subgraphs, aka \emph{graphlets} or \emph{motifs}, in large graphs. The current state-of-the-art algorithms estimate the motif counts via uniform sampling, by…

数据结构与算法 · 计算机科学 2021-07-20 Marco Bressan , Stefano Leucci , Alessandro Panconesi

Exploring small connected and induced subgraph patterns (CIS patterns, or graphlets) has recently attracted considerable attention. Despite recent efforts on computing the number of instances a specific graphlet appears in a large graph…

社会与信息网络 · 计算机科学 2016-05-02 Pinghui Wang , Xiangliang Zhang , Zhenguo Li , Jiefeng Cheng , John C. S. Lui , Don Towsley , Junzhou Zhao , Jing Tao , Xiaohong Guan

One fundamental problem in temporal graph analysis is to count the occurrences of small connected subgraph patterns (i.e., motifs), which benefits a broad range of real-world applications, such as anomaly detection, structure prediction,…

机器学习 · 计算机科学 2022-04-21 Zhongqiang Gao , Chuanqi Cheng , Yanwei Yu , Lei Cao , Chao Huang , Junyu Dong

Exploring statistics of locally connected subgraph patterns (also known as network motifs) has helped researchers better understand the structure and function of biological and online social networks (OSNs). Nowadays the massive size of…

社会与信息网络 · 计算机科学 2014-03-28 Pinghui Wang , John C. S. Lui , Bruno Ribeiro , Don Towsley , Junzhou Zhao , Xiaohong Guan

Network motif algorithms have been a topic of research mainly after the 2002-seminal paper from Milo \emph{et al}, that provided motifs as a way to uncover the basic building blocks of most networks. In Bioinformatics, motifs have been…

数据结构与算法 · 计算机科学 2013-04-22 Luis A. A. Meira , Vinicius R. Máximo , Álvaro L. Fazenda , Arlindo F. da Conceição

The randomized technique of color coding is behind state-of-the-art algorithms for estimating graph motif counts. Those algorithms, however, are not yet capable of scaling well to very large graphs with billions of edges. In this paper we…

数据库 · 计算机科学 2019-06-05 Marco Bressan , Stefano Leucci , Alessandro Panconesi

Counting the frequency of small subgraphs is a fundamental technique in network analysis across various domains, most notably in bioinformatics and social networks. The special case of triangle counting has received much attention. Getting…

数据结构与算法 · 计算机科学 2014-11-19 Madhav Jha , C. Seshadhri , Ali Pinar

Computing subgraph frequencies is a fundamental task that lies at the core of several network analysis methodologies, such as network motifs and graphlet-based metrics, which have been widely used to categorize and compare networks from…

数据结构与算法 · 计算机科学 2021-12-30 Pedro Ribeiro , Pedro Paredes , Miguel E. P. Silva , David Aparicio , Fernando Silva

Pattern counting in graphs is fundamental to network science tasks, and there are many scalable methods for approximating counts of small patterns, often called motifs, in large graphs. However, modern graph datasets now contain richer…

社会与信息网络 · 计算机科学 2018-10-03 Paul Liu , Austin Benson , Moses Charikar

Counting the frequency of small subgraphs is a fundamental technique in network analysis across various domains, most notably in bioinformatics and social networks. The special case of triangle counting has received much attention. Getting…

社会与信息网络 · 计算机科学 2016-11-01 Ali Pinar , C. Seshadhri , V. Vishal

Network motif provides a way to uncover the basic building blocks of most complex networks. This task usually demands high computer processing, specially for motif with 5 or more vertices. This paper presents an extended methodology with…

数据结构与算法 · 计算机科学 2018-04-27 Luis A. A. Meira , Vinícius R. Máximo , Alvaro L. Fazenda , Arlindo F. da Conceição

We introduce Tiered Sampling, a novel technique for approximate counting sparse motifs in massive graphs whose edges are observed in a stream. Our technique requires only a single pass on the data and uses a memory of fixed size $M$, which…

数据结构与算法 · 计算机科学 2017-10-06 Lorenzo De Stefani , Erisa Terolli , Eli Upfal

Motif counting plays a crucial role in understanding the structural properties of networks. By computing motif frequencies, researchers can draw key insights into the structural properties of the underlying network. As networks become…

社会与信息网络 · 计算机科学 2025-03-26 Haozhe Yin , Kai Wang , Wenjie Zhang , Yizhang He , Ying Zhang , Xuemin Lin

From social science to biology, numerous applications often rely on graphlets for intuitive and meaningful characterization of networks at both the global macro-level as well as the local micro-level. While graphlets have witnessed a…

社会与信息网络 · 计算机科学 2016-02-17 Nesreen K. Ahmed , Jennifer Neville , Ryan A. Rossi , Nick Duffield , Theodore L. Willke

We address the problem of understanding the variable abundance of 3-node and 4-node subgraphs (motifs) in complex networks from a dynamical point of view. As a criterion in the determination of the functional significance of a n-node…

生物物理 · 物理学 2009-11-13 Ivano Lodato , Stefano Boccaletti , Vito Latora

Network motifs are recurrent, small-scale patterns of interactions observed frequently in a system. They shed light on the interplay between the topology and the dynamics of complex networks across various domains. In this work, we focus on…

社会与信息网络 · 计算机科学 2023-11-08 Quintino Francesco Lotito , Federico Musciotto , Federico Battiston , Alberto Montresor

Characterizing motif (i.e., locally connected subgraph patterns) statistics is important for understanding complex networks such as online social networks and communication networks. Previous work made the strong assumption that the graph…

社会与信息网络 · 计算机科学 2015-02-25 Pinghui Wang , John C. S. Lui , Don Towsley
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