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Several efforts are currently underway to decipher the connectome or parts thereof in a variety of organisms. Ascertaining the detailed physiological properties of all the neurons in these connectomes, however, is out of the scope of such…

神经元与认知 · 定量生物学 2014-04-03 Venkatakrishnan Ramaswamy , Arunava Banerjee

The nervous system is today recognized to play an important role in the development of cancer. Indeed, neurons extend long processes (axons) that grow and infiltrate tumors in order to regulate the progression of the disease in a positive…

动力系统 · 数学 2022-05-25 Sophie Chauvet , Florence Hubert , Fanny Mann , Mathieu Mezache

Undirected graphical models are compact representations of joint probability distributions over random variables. To solve inference tasks of interest, graphical models of arbitrary topology can be trained using empirical risk minimization.…

机器学习 · 计算机科学 2020-10-23 Adarsh K. Jeewajee , Leslie P. Kaelbling

The dynamics of cellular pattern formation is crucial for understanding embryonic development and tissue morphogenesis. Recent studies have shown that human dermal fibroblasts cultured on liquid crystal elastomers can exhibit an increase in…

生物物理 · 物理学 2023-08-25 Mengyang Gu , Xinyi Fang , Yimin Luo

Recent developments in network neuroscience have highlighted the importance of developing techniques for analyzing and modeling brain networks. A particularly powerful approach for studying complex neural systems is to formulate generative…

神经元与认知 · 定量生物学 2022-09-09 Viplove Arora , Enrico Amico , Joaquín Goñi , Mario Ventresca

First-principles-based modelings have been extremely successful in providing crucial insights and predictions for complex biological functions and phenomena. However, they can be hard to build and expensive to simulate for complex living…

适应与自组织系统 · 物理学 2024-11-26 Ruilin Zhang , Zhongyi Wang , Tianyi Wu , Yuhang Cai , Louis Tao , Zhuo-Cheng Xiao , Yao Li

Directed acyclic graphs (DAGs) constitute a central modeling tool to enable principled reasoning about cause-effect interactions in complex systems. However, since the causal structure underlying a group of variables is often unknown and…

机器学习 · 统计学 2026-05-25 Gonzalo Mateos , Samuel Rey , Hamed Ajorlou , Mariano Tepper

In this work, a conceptual bio-inspired parallel and distributed learning framework for the emergence of general intelligence is proposed, where agents evolve through environmental rewards and learn throughout their lifetime without…

神经与进化计算 · 计算机科学 2020-09-23 Sidney Pontes-Filho , Stefano Nichele

We propose a novel model named Multi-Channel Attention Selection Generative Adversarial Network (SelectionGAN) for guided image-to-image translation, where we translate an input image into another while respecting an external semantic…

计算机视觉与模式识别 · 计算机科学 2022-10-07 Hao Tang , Philip H. S. Torr , Nicu Sebe

The actual mechanism(s) powering galactic outflows in active galactic nuclei (AGN) is still a matter of debate. At least two physical models have been considered in the literature: wind shocks and radiation pressure on dust. Here we provide…

星系天体物理 · 物理学 2021-02-10 W. Ishibashi , A. C. Fabian , N. Arakawa

Dynamic Causal Modeling (DCM) is a Bayesian framework for inferring on hidden (latent) neuronal states, based on measurements of brain activity. Since its introduction in 2003 for functional magnetic resonance imaging data, DCM has been…

定量方法 · 定量生物学 2021-04-08 Inês Pereira , Stefan Frässle , Jakob Heinzle , Dario Schöbi , Cao Tri Do , Moritz Gruber , Klaas E. Stephan

Gene regulatory networks (GRNs) play a central role in cellular decision-making. Understanding their structure and how it impacts their dynamics constitutes thus a fundamental biological question. GRNs are frequently modeled as Boolean…

分子网络 · 定量生物学 2024-01-19 Claus Kadelka , Taras-Michael Butrie , Evan Hilton , Jack Kinseth , Addison Schmidt , Haris Serdarevic

When a neuron fires and the resulting action potential travels down its axon toward other neurons' dendrites, the effect on each of those neurons is mediated by the weight of the synapse that separates it from the firing neuron. This…

神经元与认知 · 定量生物学 2010-02-19 Andre Nathan , Valmir C. Barbosa

We show that goal-directed action planning and generation in a teleological framework can be formulated using the free energy principle. The proposed model, which is built on a variational recurrent neural network model, is characterized by…

机器人学 · 计算机科学 2022-04-13 Takazumi Matsumoto , Wataru Ohata , Fabien C. Y. Benureau , Jun Tani

Attack Graph (AG) represents the best-suited solution to support cyber risk assessment for multi-step attacks on computer networks, although their generation suffers from poor scalability due to their combinatorial complexity. Current…

密码学与安全 · 计算机科学 2024-09-10 Alessandro Palma , Marco Angelini

Diffusion models (DMs) have achieved remarkable success in image and video generation. However, they still struggle with (1) physical alignment and (2) out-of-distribution (OOD) instruction following. We argue that these issues stem from…

计算机视觉与模式识别 · 计算机科学 2025-12-16 Shu Yu , Chaochao Lu

Imitation learning, which learns agent policy by mimicking expert demonstration, has shown promising results in many applications such as medical treatment regimes and self-driving vehicles. However, it remains a difficult task to interpret…

机器学习 · 计算机科学 2024-01-31 Tianxiang Zhao , Wenchao Yu , Suhang Wang , Lu Wang , Xiang Zhang , Yuncong Chen , Yanchi Liu , Wei Cheng , Haifeng Chen

We present a simple, effective, and general activation function we term ACON which learns to activate the neurons or not. Interestingly, we find Swish, the recent popular NAS-searched activation, can be interpreted as a smooth approximation…

计算机视觉与模式识别 · 计算机科学 2021-04-19 Ningning Ma , Xiangyu Zhang , Ming Liu , Jian Sun

By folding into particular 3D structures, proteins play a key role in living beings. To learn meaningful representation from a protein structure for downstream tasks, not only the global backbone topology but the local fine-grained…

生物大分子 · 定量生物学 2025-02-05 Jiahan Li , Shitong Luo , Congyue Deng , Chaoran Cheng , Jiaqi Guan , Leonidas Guibas , Jian Peng , Jianzhu Ma

Efficient coding theory posits that sensory circuits transform natural signals into neural representations that maximize information transmission subject to resource constraints. Local interneurons are thought to play an important role in…

神经元与认知 · 定量生物学 2025-01-22 David Lipshutz , Eero P. Simoncelli