相关论文: Lempel Ziv Computation In Small Space (LZ-CISS)

We study the approximate string matching and regular expression matching problem for the case when the text to be searched is compressed with the Ziv-Lempel adaptive dictionary compression schemes. We present a time-space trade-off that…

The longest common prefix (LCP) array is a versatile auxiliary data structure in indexed string matching. It can be used to speed up searching using the suffix array (SA) and provides an implicit representation of the topology of an…

Let $L$ be a degree-$2$ $L$-function associated to a Maass cusp form. We explore an algorithm that evaluates $t$ values of $L$ on the critical line in time $O(t^{1+\varepsilon})$. We use this algorithm to rigorously compute an abundance of…

Re-Pair is a grammar compression scheme with favorably good compression rates. The computation of Re-Pair comes with the cost of maintaining large frequency tables, which makes it hard to compute Re-Pair on large scale data sets. As a…

We study the sensitivity of the Lempel-Ziv 77 compression algorithm to edits, showing how modifying a string $w$ can deteriorate or improve its compression. Our first result is a tight upper bound for $k$ edits: $\forall w' \in B(w,k)$, we…

Unlike in statistical compression, where Shannon's entropy is a definitive lower bound, no such clear measure exists for the compressibility of repetitive sequences. Since statistical entropy does not capture repetitiveness, ad-hoc measures…

Computing the {\em matching statistics} of a string $P[1..m]$ with respect to a text $T[1..n]$ is a fundamental problem which has application to genome sequence comparison. In this paper, we study the problem of computing the matching…

We revisit a fundamental problem in string matching: given a pattern of length m and a text of length n, both over an alphabet of size $\sigma$, compute the Hamming distance between the pattern and the text at every location. Several…

Given matrices A and B and vectors a, b, c and d, all with non-negative entries, we consider the problem of computing min {c.x: x in Z^n_+, Ax > a, Bx < b, x < d}. We give a bicriteria-approximation algorithm that, given epsilon in (0, 1],…

Re-Pair is an efficient grammar compressor that operates by recursively replacing high-frequency character pairs with new grammar symbols. The most space-efficient linear-time algorithm computing Re-Pair uses $(1+\epsilon)n+\sqrt n$ words…

The suffix array and the suffix tree are the two most fundamental data structures for string processing. For a length-$n$ text, however, they use $\Theta(n \log n)$ bits of space, which is often too costly. To address this, Grossi and…

We derive upper and lower bounds on the overall compression ratio of the 1978 Lempel-Ziv (LZ78) algorithm, applied independently to $k$-blocks of a finite individual sequence. Both bounds are given in terms of normalized empirical entropies…

Given $d$ strings over the alphabet $\{0,1,\ldots,\sigma{-}1\}$, the classical Aho--Corasick data structure allows us to find all $occ$ occurrences of the strings in any text $T$ in $O(|T| + occ)$ time using $O(m\log m)$ bits of space,…

Usual information theoretical results show a logarithmic coding factor of value spaces to digital binary spaces using p-adic numbering systems. The following paper discusses a less commonly used case. It applies the same results to the…

Taking the covering dimension dim as notion for the dimension of a topological space, we first specify thenumber zdim_{T_0}(n) of zero-dimensional T_0-spaces on {1,...,n}$ and the number zdim(n) of zero-dimensional arbitrary topological…

Given an LZW/LZ78 compressed text, we want to find an approximate occurrence of a given pattern of length m. The goal is to achieve time complexity depending on the size n of the compressed representation of the text instead of its length.…

We present a framework facilitating the implementation and comparison of text compression algorithms. We evaluate its features by a case study on two novel compression algorithms based on the Lempel-Ziv compression schemes that perform well…

In this paper we investigate the problem of partitioning an input string T in such a way that compressing individually its parts via a base-compressor C gets a compressed output that is shorter than applying C over the entire T at once.…

Converting a compressed format of a string into another compressed format without an explicit decompression is one of the central research topics in string processing. We discuss the problem of converting the run-length Burrows-Wheeler…

We introduce efficient $(1+\varepsilon)$-approximation algorithms for the binary matrix factorization (BMF) problem, where the inputs are a matrix $\mathbf{A}\in\{0,1\}^{n\times d}$, a rank parameter $k>0$, as well as an accuracy parameter…