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We give an intuitive though general explanation of the finite-size effect in scale-free networks in terms of the degree distribution of the starting network. This result clarifies the relevance of the starting network in the final degree…

物理与社会 · 物理学 2011-07-14 Sara Cuenda , Juan A. Crespo

We investigate the functioning of a classifying biological neural network from the perspective of statistical learning theory, modelled, in a simplified setting, as a continuous-time stochastic recurrent neural network (RNN) with identity…

机器学习 · 统计学 2023-09-13 Wiebke Bartolomaeus , Youness Boutaib , Sandra Nestler , Holger Rauhut

The focus of this work is on estimation of the in-degree distribution in directed networks from sampling network nodes or edges. A number of sampling schemes are considered, including random sampling with and without replacement, and…

统计方法学 · 统计学 2018-10-03 Nelson Antunes , Shankar Bhamidi , Tianjian Guo , Vladas Pipiras , Bang Wang

We investigate random graphs on the points of a Poisson process in $d$-dimensional space, which combine scale-free degree distributions and long-range effects. Every Poisson point carries an independent random mark and given marks and…

概率论 · 数学 2022-05-02 Peter Gracar , Markus Heydenreich , Christian Mönch , Peter Mörters

The co-evolution of network topology and dynamics is studied in an evolutionary Boolean network model that is a simple model of gene regulatory network. We find that a critical state emerges spontaneously resulting from interplay between…

统计力学 · 物理学 2007-05-23 Min Liu , Kevin E. Bassler

We introduce a minimalistic model based on dynamic node deletion and node duplication with heterodimerisation. The model is intended to capture the essential features of the evolution of protein interaction networks. We derive an exact…

生物物理 · 物理学 2009-11-13 Nadia Farid , Kim Christensen

The effects of link rewiring are considered for the class of directed networks where each node has the same fixed out-degree. We model a network generated by three mechanisms that are present in various networked systems; growth, global…

物理与社会 · 物理学 2015-06-22 Ewan R. Colman , Geoff J. Rodgers

Rooted phylogenetic networks allow biologists to represent evolutionary relationships between present-day species by revealing ancestral speciation and hybridization events. A convenient and well-studied class of such networks are…

种群与进化 · 定量生物学 2026-02-02 Qiang Zhang , Mike Steel

We introduce a novel training principle for probabilistic models that is an alternative to maximum likelihood. The proposed Generative Stochastic Networks (GSN) framework is based on learning the transition operator of a Markov chain whose…

机器学习 · 计算机科学 2014-05-27 Yoshua Bengio , Éric Thibodeau-Laufer , Guillaume Alain , Jason Yosinski

A bredge (bridge-edge) is an edge whose deletion would split the network component on which it resides into two components. Bredges are vulnerable links that play an important role in network collapse processes, which may result from node…

无序系统与神经网络 · 物理学 2020-09-09 Haggai Bonneau , Ofer Biham , Reimer Kühn , Eytan Katzav

We provide the first classification of different types of Random Boolean Networks (RBNs). We study the differences of RBNs depending on the degree of synchronicity and determinism of their updating scheme. For doing so, we first define…

计算复杂性 · 计算机科学 2007-05-23 Carlos Gershenson

The polynomial birth-death distribution (abbr. as PBD) on $\ci=\{0,1,2, >...\}$ or $\ci=\{0,1,2, ..., m\}$ for some finite $m$ introduced in Brown & Xia (2001) is the equilibrium distribution of the birth-death process with birth rates…

概率论 · 数学 2010-04-13 Aihua Xia , Fuxi Zhang

We study the organization and dynamics of growing directed networks. These networks are built by adding nodes successively in such a way that each new node has $K$ directed links to the existing ones. The organization of a growing directed…

统计力学 · 物理学 2016-08-31 Baosheng Yuan , Kan Chen , Bing-Hong Wang

In this paper, we propose an SIR spread model in a population network coupled with an infrastructure network that has a pathogen spreading in it. We develop a threshold condition to characterize the monotonicity and peak time of a weighted…

系统与控制 · 电气工程与系统科学 2026-04-08 José I. Caiza , Junjie Qin , Philip E. Paré

Modeling and generating graphs is fundamental for studying networks in biology, engineering, and social sciences. However, modeling complex distributions over graphs and then efficiently sampling from these distributions is challenging due…

机器学习 · 计算机科学 2018-06-26 Jiaxuan You , Rex Ying , Xiang Ren , William L. Hamilton , Jure Leskovec

We consider bond percolation on random graphs with given degrees and bounded average degree. In particular, we consider the order of the largest component after the random deletion of the edges of such a random graph. We give a rough…

组合数学 · 数学 2022-01-12 Nikolaos Fountoulakis , Felix Joos , Guillem Perarnau

We present a probabilistic model for learning from dynamic relational data, wherein the observed interactions among networked nodes are modeled via the Bernoulli Poisson link function, and the underlying network structure are characterized…

社会与信息网络 · 计算机科学 2018-05-29 Sikun Yang , Heinz Koeppl

Growing evidence suggests that synaptic weights in the brain follow heavy-tailed distributions, yet most theoretical analyses of recurrent neural networks (RNNs) assume Gaussian connectivity. We systematically study the activity of RNNs…

神经元与认知 · 定量生物学 2025-10-27 Yi Xie , Stefan Mihalas , Łukasz Kuśmierz

In this article, we explicitly derive the limiting degree distribution of the shortest path tree from a single source on various random network models with edge weights. We determine the asymptotics of the degree distribution for large…

The stochastic block model is a powerful tool for inferring community structure from network topology. However, it predicts a Poisson degree distribution within each community, while most real-world networks have a heavy-tailed degree…

社会与信息网络 · 计算机科学 2012-06-01 Yaojia Zhu , Xiaoran Yan , Cristopher Moore
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