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Neural network models in neuroscience allow one to study how the connections between neurons shape the activity of neural circuits in the brain. In this chapter, we study Combinatorial Threshold-Linear Networks (CTLNs) in order to…

神经元与认知 · 定量生物学 2018-04-05 Katherine Morrison , Carina Curto

Link prediction for directed graphs is a crucial task with diverse real-world applications. Recent advances in embedding methods and Graph Neural Networks (GNNs) have shown promising improvements. However, these methods often lack a…

机器学习 · 计算机科学 2025-05-22 Mingguo He , Yuhe Guo , Yanping Zheng , Zhewei Wei , Stephan Günnemann , Xiaokui Xiao

Representation of brain network interactions is fundamental to the translation of neural structure to brain function. As such, methodologies for mapping neural interactions into structural models, i.e., inference of functional connectome…

神经元与认知 · 定量生物学 2022-03-18 Rahul Biswas , Eli Shlizerman

Directed networks are essential for representing complex systems, capturing the asymmetry of interactions in fields such as neuroscience, transportation, and social networks. Directionality reveals how influence, information, or resources…

无序系统与神经网络 · 物理学 2024-12-23 Marián Boguñá , M. Ángeles Serrano

To infer information flow in any network of agents, it is important first and foremost to establish causal temporal relations between the nodes. Practical and automated methods that can infer causality are difficult to find, and the subject…

神经与进化计算 · 计算机科学 2024-12-11 Ali Tehrani-Saleh , Christoph Adami

There is increasing evidence to suggest functional connectivity networks are non-stationary. This has lead to the development of novel methodologies with which to accurately estimate time-varying functional connectivity networks. Many of…

The structure of the majority of modern deep neural networks is characterized by uni- directional feed-forward connectivity across a very large number of layers. By contrast, the architecture of the cortex of vertebrates contains fewer…

机器学习 · 计算机科学 2017-06-23 Sebastian Herzog , Christian Tetzlaff , Florentin Wörgötter

Granger causal inference is a contentious but widespread method used in fields ranging from economics to neuroscience. The original definition addresses the notion of causality in time series by establishing functional dependence…

统计方法学 · 统计学 2023-09-19 Noah D. Gade , Jordan Rodu

We prove a Large Deviation Principle for {\color{blue} jump-Markov } Processes on sparse large disordered network with disordered connectivity. The network is embedded in a geometric space, with the probability of a connection a (scaled)…

概率论 · 数学 2026-02-02 James MacLaurin

Sparse random networks contain structures that can be considered as diluted feed-forward networks. Modeling of cortical circuits has shown that feed-forward structures, if strongly pronounced compared to the embedding random network, enable…

神经元与认知 · 定量生物学 2013-08-16 Sven Jahnke , Marc Timme , Raoul-Martin Memmesheimer

The brain can be regarded as a network: a connected system where nodes, or units, represent different specialized regions and links, or connections, represent communication pathways. From a functional perspective communication is coded by…

神经元与认知 · 定量生物学 2014-09-10 Fabrizio De Vico Fallani , Jonas Richiardi , Mario Chavez , Sophie Achard

Granger causality (GC), a popular statistical method for the inference of directional influences between time series measured from a complex network, is sensitive to high-order (non-pairwise) interactions which fundamentally shape the…

We propose a novel extension to symmetrized neural network operators by incorporating fractional and mixed activation functions. This study addresses the limitations of existing models in approximating higher-order smooth functions,…

The purpose of this paper is to outline a generalised model for representing hybrids of relational-categorical, symbolic, perceptual-sensory and perceptual-latent data, so as to embody, in the same architectural data layer, representations…

机器学习 · 计算机科学 2020-04-29 Bogdan Bocse , Ioan Radu Jinga

We present Supervised Deep Multimodal Matrix Factorization (SD3MF), an interpretable framework for integrative brain network analysis that generalizes Symmetric Nonnegative Matrix Tri-Factorization (SNMTF) from unsupervised single-graph…

机器学习 · 计算机科学 2026-05-14 Amjad Seyedi , Lifang He , Songlin Zhao , Akwum Onwunta , Nicolas Gillis

Objectives: We develop a framework for the analysis of synergy and redundancy in the pattern of information flow between subsystems of a complex network. Methods: The presence of redundancy and/or synergy in multivariate time series data…

This paper introduces a novel approach for modelling time-varying connectivity in neuroimaging data, focusing on the slow fluctuations in synaptic efficacy that mediate neuronal dynamics. Building on the framework of Dynamic Causal…

神经元与认知 · 定量生物学 2024-12-05 Johan Medrano , Karl J. Friston , Peter Zeidman

While correlation measures are used to discern statistical relationships between observed variables in almost all branches of data-driven scientific inquiry, what we are really interested in is the existence of causal dependence. Designing…

机器学习 · 计算机科学 2014-06-26 Ishanu Chattopadhyay

We here unify the field theoretical approach to neuronal networks with large deviations theory. For a prototypical random recurrent network model with continuous-valued units, we show that the effective action is identical to the rate…

无序系统与神经网络 · 物理学 2021-10-13 Alexander van Meegen , Tobias Kühn , Moritz Helias

The mathematical model underlying the Neural Engineering Framework (NEF) expresses neuronal input as a linear combination of synaptic currents. However, in biology, synapses are not perfect current sources and are thus nonlinear. Detailed…

神经元与认知 · 定量生物学 2017-10-24 Andreas Stöckel , Aaron R. Voelker , Chris Eliasmith