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A liquid crystal continuum modeling framework for icosahedra bacteriophage viruses is developed and tested. The main assumptions of the model are the chromonic columnar hexagonal structure of confined DNA, the high resistance to bending and…

软凝聚态物质 · 物理学 2017-12-05 Javier Arsuaga , Maria-Carme Calderer , Lindsey Hiltner , Mariel Vazquez

Discontinuous transitions into absorbing states require an effective mechanism that prevents the stabilization of low density states. They can be found in different systems, such as lattice models or stochastic differential equations (e.g.…

统计力学 · 物理学 2015-08-12 Salete Pianegonda , Carlos E. Fiore

Starting from operator equations of motion and making arguments based on a separation of time scales, a set of equations is derived which govern the non-equilibrium time evolution of a GeV-scale sterile neutrino density matrix and active…

高能物理 - 唯象学 · 物理学 2017-05-30 J. Ghiglieri , M. Laine

We develop the elastically collective nonlinear Langevin equation theory of bulk relaxation of glass-forming liquids to investigate molecular mobility under compression conditions. The applied pressure restricts more molecular motion and…

软凝聚态物质 · 物理学 2020-04-24 Anh D. Phan , Agnieszka Jedrzejowska , Marian Paluch , Katsunori Wakabayashi

Molecular transport maintains cellular structures and functions. For example, lipid and protein diffusion sculpts the dynamic shapes and structures on the cell membrane that perform essential cellular functions, such as cell signaling.…

软凝聚态物质 · 物理学 2024-04-17 Saurav G. Varma , Argha Mitra , Sumantra Sarkar

Generative diffusion models apply the concept of Langevin dynamics in physics to machine leaning, attracting a lot of interests from engineering, statistics and physics, but a complete picture about inherent mechanisms is still lacking. In…

统计力学 · 物理学 2025-01-07 Zhendong Yu , Haiping Huang

There is much current interest in modelling suspensions of algae and other micro-organisms for biotechnological exploitation, and many bioreactors are of tubular design. Using generalized Taylor dispersion theory, we develop a…

生物物理 · 物理学 2013-02-28 R. N. Bearon , M. A. Bees , O. A. Croze

Swimming bacteria create long-range velocity fields that stir a large volume of fluid and move around passive particles dispersed in the fluid. Recent experiments and simulations have shown that long-time mean-squared displacement of…

软凝聚态物质 · 物理学 2013-08-20 Alexander Morozov , Davide Marenduzzo

Bacteria can form a great variety of spatially heterogeneous cell density patterns, ranging from simple concentric rings to dynamical spiral waves appearing in growing colonies. These pattern formation phenomena are important as they…

种群与进化 · 定量生物学 2025-01-17 John S. Chuang , Riccardo Rao , Stanislas Leibler

Many bacterial species are helical in form, including the widespread pathogen H. pylori. Motivated by recent experiments on H. pylori showing that cell wall synthesis is not uniform, we investigate the possible formation of helical cell…

软凝聚态物质 · 物理学 2024-01-15 Cesar L. Pastrana , Luyi Qiu , Shahaf Armon , Ulrich Gerland , Ariel Amir

The femtosecond response of NO-doped rare gas matrices is studied within a stochastic Langevin theoretical framework. As is shown, a simple damped harmonic oscillator model can describe properly the absorption and emission line shapes…

化学物理 · 物理学 2009-12-28 G. Rojas-Lorenzo , A. S. Sanz , J. Rubayo-Soneira , S. Miret-Artes

We describe a percolation-type approach to modeling of the processes of aging and certain other properties of tissues analyzed as systems consisting of interacting cells. Tissues are considered as structures made of regular healthy,…

统计力学 · 物理学 2016-01-28 Vladimir Privman , Vyacheslav Gorshkov , Sergiy Libert

Conventional X-ray methods use incoming plane waves and result in discrete diffraction patterns when scattered at crystals. Here we find, by a systematic method, incoming waveforms which exhibit discrete diffraction patterns when scattered…

光学 · 物理学 2015-06-16 Gero Friesecke , Richard D. James , Dominik Jüstel

We propose a theoretical model which relies on the generalized Langevin equation and may account for various dynamical features of the thermal motion of organelles, vesicles or macromolecules in viscoelastic media such as polymer networks.…

软凝聚态物质 · 物理学 2020-01-03 Denis S. Grebenkov , Mahsa Vahabi , Elena Bertseva , Laszlo Forro , Sylvia Jeney

We use direct numerical simulations to compute turbulent transport coefficients for passive scalars in turbulent rotating flows. Effective diffusion coefficients in the directions parallel and perpendicular to the rotations axis are…

流体动力学 · 物理学 2013-02-13 P. Rodriguez Imazio , P. D. Mininni

We present a simplified model of the outer heliosheath to help interpret the observations of interstellar neutral helium by the IBEX-Lo instruments. We assume that the measured particles are composed of the superposition of a primary beam…

太阳与恒星天体物理 · 物理学 2017-11-28 Philip A. Isenberg , Harald Kucharek , Jeewoo Park

We present a numerical and partially analytical study of classical particles obeying a Langevin equation that describes diffusion on a surface modeled by a two dimensional potential. The potential may be either periodic or random. Depending…

统计力学 · 物理学 2009-11-10 A. M. Lacasta , J. M. Sancho , A. H. Romero , I. M. Sokolov , K. Lindenberg

We consider the inverse problem of reconstructing the posterior measure over the trajec- tories of a diffusion process from discrete time observations and continuous time constraints. We cast the problem in a Bayesian framework and derive…

机器学习 · 统计学 2016-12-21 Botond Cseke , David Schnoerr , Manfred Opper , Guido Sanguinetti

During drying of colloidal suspensions, colloidal particles can form concentrated particle layers beneath the receding free surface. The drying rate can gradually decrease with the growth of the particle layers. We construct a model to…

软凝聚态物质 · 物理学 2023-06-22 Rei Tatsumi , Osamu Koike , Yukio Yamaguchi , Yoshiko Tsuji

We discuss the hydrodynamic collective effects due to active protein molecules that are immersed in lipid bilayer membranes and modeled as stochastic force dipoles. We specifically take into account the presence of the bulk solvent which…

软凝聚态物质 · 物理学 2017-05-24 Yuto Hosaka , Kento Yasuda , Ryuichi Okamoto , Shigeyuki Komura