相关论文: Analysis of correlation structures in the Synechoc…

Non-Hermitian systems give rise to distinct topological phenomena, yet their manifestations at temporal interfaces characterized by abrupt changes in system parameters remain largely unex plored. Upon an abrupt alteration of the Hamiltonian…

Comparative genomics methods are widely used to aid the functional annotation of non coding DNA regions. However, aligning non coding sequences requires new algorithms and strategies, in order to take into account extensive rearrangements…

The distribution of bases spacing in human genome was investigated. An analysis of the frequency of occurrence in the human genome of different sequence lengths flanked by one type of nucleotide was carried out showing that the distribution…

We show how representations of finite-dimensional quantum operators can be constructed using nondeterministic rewriting systems. In particular, we investigate Wolfram model multiway rewriting systems based on string substitutions. Multiway…

Sequencing by synthesis is the underlying technology for many next-generation DNA sequencing platforms. We developed a new model, the fixed flow cycle model, to derive the distributions of sequence length for a given number of flow cycles…

Unbalanced translocations are among the most frequent chromosomal alterations, accounted for 30\% of all losses of heterozygosity, a major genetic event causing inactivation of tumor suppressor genes. Despite of their central role in…

We present a Coherent X-ray Diffraction study of the antiferrodistortive displacive transition of SrTiO$_3$, a prototypical example of a phase transition for which the critical fluctuations exhibit two length scales and two time scales.…

The organization of higher-order interactions plays a central role in shaping collective dynamics, yet a general structural principle governing contagion on hypergraphs remains lacking. Here we introduce a nesting coefficient that…

Active (catalysed) and passive (intrinsic) nucleosome repositioning is known to be a crucial event during the transcriptional activation of certain eucaryotic genes. Here we consider theoretically the intrinsic mechanism and study in detail…

Studies of coevolution of amino acids within and between proteins have revealed two types of coevolving units: coevolving contacts, which are pairs of amino acids distant along the sequence but in contact in the three-dimensional structure,…

Given natural limitations on the length DNA sequences, designing phylogenetic reconstruction methods which are reliable under limited information is a crucial endeavor. There have been two approaches to this problem: reconstructing partial…

Mapping between sequence and structure is currently an open problem in structural biology. Despite many experimental and computational efforts it is not clear yet how the structure is encoded in the sequence. Answering this question may…

Cyanobacteria sequester photosynthetic enzymes into microcompartments which facilitate the conversion of carbon dioxide into sugars. Geometric similarities between these structures and self-assembling viral capsids have inspired models that…

Phase correlations are an under-explored vulnerability in QKD. Here, we present an experimental and simulated characterization of correlations arising from electro-optic phase encoding, over repetition rates up to the GHz level. To mitigate…

Long lived coherent quasiparticles are a promising foundation for novel quantum technologies, where maintaining quantum coherence is crucial. Decoherence, driven by finite emitter lifetimes, remains a central challenge in quantum computing.…

Many biological tissues feature a heterogeneous network of fibers whose tensile and bending rigidity contribute substantially to these tissues' elastic properties. Rigidity percolation has emerged as a important paradigm for relating these…

Developing networks of neural systems can exhibit spontaneous, synchronous activities called neural bursts, which can be important in the organization of functional neural circuits. Before the network matures, the activity level of a burst…

Herein it is shown that in order to study the statistical properties of DNA sequences in bacterial chromosomes it suffices to consider only one half of the chromosome because they are similar to its corresponding complementary sequence in…

The recent discovery of persistent revivals in the Rydberg-atom quantum simulator has revealed a weakly ergodicity-breaking mechanism dubbed quantum many-body scars, which are a set of nonthermal states embedded in otherwise thermal…

Nonlinear superlattices exhibit unique features allowing for wave manipulations. Despite the increasing attention received, the underlying physical mechanisms and the evolution process of the band structures and bandgaps in strongly…