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This article introduces autocorrelograms for time series of point processes. Such time series usually arise when a longer temporal or spatio-temporal point process is sliced into smaller time units; for example, when an annual process is…

统计方法学 · 统计学 2025-08-25 Daniel Gervini

We propose the use of microcanonical analyses for numerical studies of peptide aggregation transitions. Performing multicanonical Monte Carlo simulations of a simple hydrophobic-polar continuum model for interacting heteropolymers of finite…

软凝聚态物质 · 物理学 2009-11-13 Christoph Junghans , Michael Bachmann , Wolfhard Janke

We present results of large-scale Monte Carlo simulations for a three-dimensional Ising model with short range interactions and planar defects, i.e., disorder perfectly correlated in two dimensions. We show that the phase transition in this…

无序系统与神经网络 · 物理学 2009-11-10 Rastko Sknepnek , Thomas Vojta

We investigate both ensemble and time-averaged mean-squared displacements of particles in a polydisperse granular system in a homogeneous cooling state. The system contains an arbitrary number of species of different sizes and masses. The…

软凝聚态物质 · 物理学 2024-09-20 Anna S. Bodrova , Alexander I. Osinsky

We extend the program initiated in [T. Werlang et al., Phys. Rev. Lett. 105, 095702 (2010)] in several directions. Firstly, we investigate how useful quantum correlations, such as entanglement and quantum discord, are in the detection of…

量子物理 · 物理学 2015-05-27 T. Werlang , G. A. P. Ribeiro , Gustavo Rigolin

A polymer chain tethered to a surface may be compact or extended, adsorbed or desorbed, depending on interactions with the surface and the surrounding solvent. This leads to a rich phase diagram with a variety of transitions. To investigate…

软凝聚态物质 · 物理学 2009-11-13 Jutta Luettmer-Strathmann , Federica Rampf , Wolfgang Paul , Kurt Binder

The step-growth polymerisation of a mixture of arbitrary-functional monomers is viewed as a time-continuos random graph process with degree bounds that are not necessarily the same for different vertices. The sequence of degree bounds acts…

组合数学 · 数学 2019-08-21 Ivan Kryven

The self-organized Monte Carlo simulations of 2D Ising ferromagnet on the square lattice are performed. The essence of devised simulation method is the artificial dynamics consisting of the single-spin-flip algorithm of Metropolis…

计算物理 · 物理学 2009-11-10 Denis Horvath , Martin Gmitra

In this paper we study thermalization in a strongly coupled system via AdS/CFT. Initially, the energy is injected into the system by turning on a spatially homogenous scalar source coupled to a marginal composite operator. The…

高能物理 - 理论 · 物理学 2012-10-26 Bin Wu

This study presents a coarse-grained molecular dynamics simulation model to investigate the process of oxidative aging in polymers. The chemical aging effect is attributed to the auto-oxidation mechanism, which is initiated by radicals,…

软凝聚态物质 · 物理学 2023-11-28 Takato Ishida , Yuya Doi , Takashi Uneyama , Yuichi Masubuchi

Understanding the microscopic mechanisms of thermalization in closed quantum systems is among the key challenges in modern quantum many-body physics. We demonstrate a method to probe local thermalization in a large-scale many-body system by…

The nonequilibrium phase transition has been studied by Monte Carlo simulation in a ferromagnetically interacting (nearest neighbour) kinetic Ising model in presence of a sinusoidally oscillating magnetic field. The ('specific-heat')…

凝聚态物理 · 物理学 2015-06-25 Muktish Acharyya

This chapter discusses the conditions and timescales under which isolated many-body quantum systems, initially far from equilibrium, ultimately reach thermal equilibrium. We also examine quantities that, during the relaxation process,…

统计力学 · 物理学 2025-04-16 Isaías Vallejo-Fabila , Lea F. Santos

Finite systems in confining potentials are known to undergo structural transitions similar to phase transitions. However, these systems are inhomogeneous, and their "melting" point may depend on the position in the trap and vary with the…

等离子体物理 · 物理学 2015-04-29 H. Thomsen , M. Bonitz

We study the collapse transition of a polymer on a square lattice with both nearest-neighbor and next nearest-neighbor interactions, by calculating the exact partition function zeros up to chain length 36. The transition behavior is much…

统计力学 · 物理学 2012-06-06 Jae Hwan Lee , Seung-Yeon Kim , Julian Lee

Kinetics of collapse and explosion transitions in microcanonical self-gravitating ensembles is analyzed. A system of point particles interacting via an attractive soft Coulomb potential and confined to a spherical container is considered.…

统计力学 · 物理学 2009-11-10 I. Ispolatov , M. Karttunen

We present photoluminescence studies as a function of temperature from a series of conjugated polymers and a conjugated molecule with distinctly different backbone conformations. The organic materials investigated here are: planar…

We present results for the nonequilibrium dynamics of collapse for a model flexible homopolymer on simple cubic lattices with fixed and fluctuating bonds between the monomers. Results from our Monte Carlo simulations show that,…

软凝聚态物质 · 物理学 2017-10-11 Henrik Christiansen , Suman Majumder , Wolfhard Janke

We analyze a microscopic RNA model, which includes two widely used models as limiting cases, namely it contains terms for bond as well as for stacking energies. We numerically investigate possible changes in the qualitative and quantitative…

定量方法 · 定量生物学 2009-11-10 Bernd Burghardt , Alexander K. Hartmann

We review some recent coarse-graining and multi-scale methods, but also put forward some new ideas for addressing such issues. We find that, if one is guided by nonequilibrium statistical mechanics and thermodynamics, it is possible to…

软凝聚态物质 · 物理学 2009-11-06 Patrick Ilg , Vlasis Mavrantzas , Hans Christian Öttinger