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相关论文: Hydration shell effects in the relaxation dynamics…

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Non-adiabatic molecular dynamics simulations are used to analyze the role of different solvent degrees of freedom in the non-radiative relaxation of the first excited state of the hydrated electron. The relaxation occurs through a…

chem-ph · 物理学 2008-02-03 Oleg V. Prezhdo , Peter J. Rossky

The water hydration shell has decisive impact on the structural and functional properties of RNA. Changes of RNA structure upon melting and in biochemical processes are accompanied by a change of hydration patterns, a process which is…

化学物理 · 物理学 2020-03-02 Achintya Kundu , Jakob Schauss , Benjamin P. Fingerhut , Thomas Elsaesser

Electric interactions have a strong impact on the structure and dynamics of biomolecules in their native water environment. Given the variety of water arrangements in hydration shells and the femto- to subnanosecond time range of structural…

化学物理 · 物理学 2021-08-27 Thomas Elsaesser , Jakob Schauss , Achintya Kundu , Benjamin P. Fingerhut

A computational approach to describe the energy relaxation of a high-frequency vibrational mode in a fluctuating heterogeneous environment is outlined. Extending previous work [H. Fujisaki, Y. Zhang, and J.E. Straub, J. Chem. Phys. {\bf…

化学物理 · 物理学 2009-11-13 Hiroshi Fujisaki , Gerhard Stock

Numerical simulations of hydrated proteins show that protein hydration shells are polarized into a ferroelectric cluster with a large magnitude of its average dipole moment. The emergence of this new mesophase dramatically alters the…

生物物理 · 物理学 2010-06-02 David N. LeBard , Dmitry V. Matyushov

Photosynthesis relies on efficient energy relaxation within the excited-state manifold of pigment-protein complexes. Since the protein scaffold is rather flexible, the resulting energetic and structural disorder gives rise to a complex…

Understanding the ultrafast vibrational relaxation following photoexcitation of molecules in a condensed phase is essential to predict the outcome and improve the efficiency of photoinduced molecular processes. Here, the vibrational…

化学物理 · 物理学 2025-02-18 Benedikt O Birgisson , Asmus Ougaard Dohn , Hannes Jónsson , Gianluca Levi

When analyzing the broadband absorption spectrum of liquid water (10^10 - 10^13 Hz), we find its relaxation-resonance features to be an indication of Frenkel's translation-oscillation motion of particles, which is fundamentally inherent to…

软凝聚态物质 · 物理学 2026-03-26 A. A. Volkov , V. G. Artemov , A. A. Volkov , N. N. Sysoev

We study the exact fluctuating hydrodynamics of the scaled Light-Heavy model (sLH), in which two species of particles (light and heavy) interact with a fluctuating surface. This model is similar in definition to the unscaled Light-Heavy…

统计力学 · 物理学 2025-03-21 Shilpa Prakash , Mustansir Barma , Kabir Ramola

The molecular mechanism of the solvent motion that is required to instigate the protein structural relaxation above a critical hydration level or transition temperature has yet to be determined. In this work we use quasi-elastic neutron…

生物大分子 · 定量生物学 2016-09-08 Daniela Russo , Greg Hura , Teresa Head-Gordon

The photosystem II reaction centre is the photosynthetic complex responsible for oxygen production on Earth. Its water splitting function is particularly favoured by the formation of a stable charge separated state via a pathway that starts…

The solvation structures and ion dynamics of CaCl$_2$ aqueous electrolytes have been investigated using ab initio molecular dynamics simulations and molecular dynamics simulations with deep learning potentials. We found multiple solvation…

化学物理 · 物理学 2023-07-20 Zhou Yu , Lei Cheng

The observation of chemical reactions on the time scale of the motion of electrons and nuclei has been made possible by lasers with ever shortened pulse lengths. Superfluid helium represents a special solvent that permits the synthesis of…

The phase coherence relaxation times as long as $T_2\sim830-1030\pm20$ ns were measured for the [2Fe-2S] cluster in the intrinsic protein environment. This relaxation corresponds to a relatively long lasting coherence of the low-spin…

生物大分子 · 定量生物学 2015-04-02 Amgalanbaatar Baldansuren

We use transient absorption spectroscopy to monitor the ionization and dissociation products following two-photon excitation of pure liquid water. The two decay mechanisms occur with similar yield for an excitation energy of 9.3 eV, whereas…

化学物理 · 物理学 2009-11-13 Christopher G. Elles , Ilya A. Shkrob , Robert A. Crowell , Stephen E. Bradforth

Ion hydration and interfacial water play crucial roles in numerous phenomena ranging from biological to industrial systems. Although biologically relevant (and mostly smaller) ions have been studied extensively in this context, very little…

软凝聚态物质 · 物理学 2019-01-01 William Rock , Baofu Qiao , Tiecheng Zhou , Aurora E. Clark , Ahmet Uysal

Photo-switching the physical properties of molecular systems opens large possibilities for driving materials far from equilibrium toward new states. Moreover, ultra-short pulses of light make it possible to induce and to record…

The high frequency collective dynamics of liquid hydrogen fluoride is studied by inelastic x-ray scattering on the coexistence curve at T = 239 K. The comparison with existing molecular dynamics simulations shows the existence of two active…

软凝聚态物质 · 物理学 2023-08-29 R. Angelini , P. Giura , G. Monaco , G. Ruocco , F. Sette , R. Verbeni

Quantum calculations are performed for an anion water cluster representing the first hydration shell of the solvated electron in solution. The absorption spectra from the ground state, the instant excited states and the relaxed excited…

软凝聚态物质 · 物理学 2009-11-11 P. O. J. Scherer , Sighart F. Fischer

When a hydrophilic solute in water is suddenly turned into a hydrophobic species, for instance, by photoionization, a layer of hydrated water molecules forms around the solute on a time scale of a few picoseconds. We study the dynamic…

软凝聚态物质 · 物理学 2022-02-11 Henning Kirchberg , Peter Nalbach , Christian Bressler , Michael Thorwart
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