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Peptide nucleic acids (PNAs) are artificial nucleic acids with a peptide backbone instead of sugar phosphate backbone of DNA or RNA. Their resistance to degradation, selectivity and greater binding affinity in comparison to usual nucleic…

生物大分子 · 定量生物学 2019-10-18 Reyhane Alidousti , Mostafa Shakhsi-Niaee

Genome editing allows scientists to change an organism's DNA. One promising genome editing protocol, already validated in living organisms, is based on clustered regularly interspaced short palindromic repeats (CRISPR)/Cas protein-nucleic…

生物物理 · 物理学 2019-07-25 Angana Ray , Rosa Di Felice

Convolutional neural networks (CNNs) are effective at solving difficult problems like visual recognition, speech recognition and natural language processing. However, performance gain comes at the cost of laborious trial-and-error in…

神经与进化计算 · 计算机科学 2018-12-20 Yiheng Zhu , Yichen Yao , Zili Wu , Yujie Chen , Guozheng Li , Haoyuan Hu , Yinghui Xu

Early and accurate disease detection is crucial for patient management and successful treatment outcomes. However, the automatic identification of anomalies in medical images can be challenging. Conventional methods rely on large labeled…

图像与视频处理 · 电气工程与系统科学 2023-03-16 Cosmin I Bercea , Benedikt Wiestler , Daniel Rueckert , Julia A Schnabel

This work proves that semantic segmentation on minimally invasive surgical instruments can be improved by using training data that has been augmented through domain adaptation. The benefit of this method is twofold. Firstly, it suppresses…

计算机视觉与模式识别 · 计算机科学 2020-06-08 Iñigo Azqueta-Gavaldon , Florian Fröhlich , Klaus Strobl , Rudolph Triebel

Peptides play a crucial role in the drug design and discovery whether as a therapeutic modality or a delivery agent. Non-natural amino acids (NNAAs) have been used to enhance the peptide properties from binding affinity, plasma stability to…

The advent of next-generation sequencing (NGS) has revolutionized genomic research by enabling cost-effective, high-throughput sequencing of a diverse range of organisms. This breakthrough has unleashed a "Cambrian explosion" in genomic…

Accurately modeling and forecasting complex systems governed by partial differential equations (PDEs) is crucial in various scientific and engineering domains. However, traditional numerical methods struggle in real-world scenarios due to…

机器学习 · 计算机科学 2025-05-06 Han Wan , Rui Zhang , Qi Wang , Yang Liu , Hao Sun

Deep neural networks (DNNs) are increasingly used to solve partial differential equations (PDEs) that naturally arise while modeling a wide range of systems and physical phenomena. However, the accuracy of such DNNs decreases as the PDE…

机器学习 · 计算机科学 2024-03-26 Mehdi Shishehbor , Shirin Hosseinmardi , Ramin Bostanabad

In this paper, we introduce SciANN, a Python package for scientific computing and physics-informed deep learning using artificial neural networks. SciANN uses the widely used deep-learning packages Tensorflow and Keras to build deep neural…

其他计算机科学 · 计算机科学 2020-12-30 Ehsan Haghighat , Ruben Juanes

The black-box nature of Convolutional Neural Networks (CNNs) and their reliance on large datasets limit their use in complex domains with limited labeled data. Physics-Guided Neural Networks (PGNNs) have emerged to address these limitations…

计算机视觉与模式识别 · 计算机科学 2024-09-04 Kishor Datta Gupta , Marufa Kamal , Rakib Hossain Rifat , Mohd Ariful Haque , Roy George

Breast cancer is the most common invasive cancer with the highest cancer occurrence in females. Handheld ultrasound is one of the most efficient ways to identify and diagnose the breast cancer. The area and the shape information of a lesion…

计算机视觉与模式识别 · 计算机科学 2020-10-20 Jie Xing , Zheren Li , Biyuan Wang , Yuji Qi , Bingbin Yu , Farhad G. Zanjani , Aiwen Zheng , Remco Duits , Tao Tan

Convolutional Neural Networks (CNN) have been the centerpiece of many applications including but not limited to computer vision, speech processing, and Natural Language Processing (NLP). However, the computationally expensive convolution…

新兴技术 · 计算机科学 2019-07-11 Armin Mehrabian , Yousra Al-Kabani , Volker J Sorger , Tarek El-Ghazawi

Molecular subtyping of PDAC into basal-like and classical has established prognostic and predictive value. However, its use in clinical practice is limited by cost, turnaround time, and tissue requirements, thereby restricting its…

In this paper we introduce PkANN, a freely available software package for interpolating the non-linear matter power spectrum, constructed using Artificial Neural Networks (ANNs). Previously, using Halofit to calculate matter power spectrum,…

宇宙学与河外天体物理 · 物理学 2015-06-18 Shankar Agarwal , Filipe B. Abdalla , Hume A. Feldman , Ofer Lahav , Shaun A. Thomas

In this paper, we study a novel task that enables partial knowledge transfer from pre-trained models, which we term as Partial Network Cloning (PNC). Unlike prior methods that update all or at least part of the parameters in the target…

计算机视觉与模式识别 · 计算机科学 2023-03-21 Jingwen Ye , Songhua Liu , Xinchao Wang

Deep learning is an important method for molecular design and exhibits considerable ability to predict molecular properties, including physicochemical, bioactive, and ADME/T (absorption, distribution, metabolism, excretion, and toxicity)…

分子网络 · 定量生物学 2022-05-10 Hanxuan Cai , Huimin Zhang , Duancheng Zhao , Jingxing Wu , Ling Wang

Training neural networks using limited annotations is an important problem in the medical domain. Deep Neural Networks (DNNs) typically require large, annotated datasets to achieve acceptable performance which, in the medical domain, are…

计算机视觉与模式识别 · 计算机科学 2024-10-28 Bethany H. Thompson , Gaetano Di Caterina , Jeremy P. Voisey

In the past decade, Convolutional Neural Networks (CNNs) have demonstrated state-of-the-art performance in various Artificial Intelligence tasks. To accelerate the experimentation and development of CNNs, several software frameworks have…

计算机视觉与模式识别 · 计算机科学 2018-03-16 Stylianos I. Venieris , Alexandros Kouris , Christos-Savvas Bouganis

In recent years, deep learning techniques have made significant strides in molecular generation for specific targets, driving advancements in drug discovery. However, existing molecular generation methods present significant limitations:…

机器学习 · 计算机科学 2025-03-12 Taojie Kuang , Qianli Ma , Athanasios V. Vasilakos , Yu Wang , Qiang , Cheng , Zhixiang Ren
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