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In this paper, we study the significance of ecological interactions and separation of birth and death dynamics in stochastic heterogeneous populations via general birth-death processes. Interactions can manifest through the birth dynamics,…

种群与进化 · 定量生物学 2025-07-03 Erin Beckman , Heyrim Cho , Linh Huynh

Compartmentalization of biochemical processes underlies all biological systems, from the organelle to the tissue scale. Theoretical models to study the interplay between noisy reaction dynamics and compartmentalization are sparse, and…

定量方法 · 定量生物学 2022-06-08 Lorenzo Duso , Christoph Zechner

Genetic data are often used to infer demographic history and changes or detect genes under selection. Inferential methods are commonly based on models making various strong assumptions: demography and population structures are supposed…

种群与进化 · 定量生物学 2020-07-28 Clotilde Lepers , Sylvain Billiard , Matthieu Porte , Sylvie Méléard , Viet Chi Tran

Ferromagnetic models are harmonic oscillators in statistical mechanics. Beyond their original scope in tackling phase transition and symmetry breaking in theoretical physics, they are nowadays experiencing a renewal applicative interest as…

统计力学 · 物理学 2013-07-24 Elena Agliari , Adriano Barra , Andrea Galluzzi , Andrea Pizzoferrato , Daniele Tantari

The aim of this paper is to study the large population limit of a binary branching particle system with Moran type interactions: we introduce a new model where particles evolve, reproduce and die independently and, with a probability that…

概率论 · 数学 2024-04-12 Alexander M. G. Cox , Emma Horton , Denis Villemonais

This paper shows that differentiating the lifetimes of two phenotypes independently from their fertility can lead to a qualitative change in the equilibrium of a population: since survival and reproduction are distinct functional aspects of…

种群与进化 · 定量生物学 2013-05-22 Ignacio Gallo

We study the interplay of population growth and evolutionary dynamics using a stochastic model based on birth and death events. In contrast to the common assumption of an independent population size, evolution can be strongly affected by…

种群与进化 · 定量生物学 2012-06-05 Jonas Cremer , Anna Melbinger , Erwin Frey

We study a continuous time Mutually Catalytic Branching model on the $\mathbb{Z}^{d}$. The model describes the behavior of two different populations of particles, performing random walk on the lattice in the presence of branching, that is,…

概率论 · 数学 2026-01-14 Alexandra Jamchi Fugenfirov , Leonid Mytnik

Mechanisms leading to speciation are a major focus in evolutionary biology. In this paper, we present and study a stochastic model of population where individuals, with type a or A, are equivalent from ecological, demographical and spatial…

种群与进化 · 定量生物学 2017-04-20 Camille Coron , Manon Costa , Hélène Leman , Charline Smadi

We consider birth and death stochastic dynamics of particle systems with attractive interaction. The heuristic generator of the dynamics has a constant birth rate and density dependent decreasing death rate. The corresponding statistical…

数学物理 · 物理学 2015-06-18 Dmitri Finkelshtein , Yuri Kondratiev , Oleksandr Kutoviy , Elena Zhizhina

This paper deals with the stochastic modeling of a class of heterogeneous population in a random environment, called birth-death-swap. In addition to demographic events, swap events, i.e. moves between subgroups, occur in the population.…

概率论 · 数学 2024-02-28 Sarah Kaakai , Nicole El Karoui

The behavior of interacting populations typically displays irregular temporal and spatial patterns that are difficult to reconcile with an underlying deterministic dynamics. A classical example is the heterogeneous distribution of plankton…

种群与进化 · 定量生物学 2009-11-13 M. H. Vainstein , J. M. Rubi , J. M. G. Vilar

The internal behaviour of a population is an important feature to take account of when modelling their dynamics. In line with kin selection theory, many social species tend to cluster into distinct groups in order to enhance their overall…

统计方法学 · 统计学 2023-11-02 Blake McGrane-Corrigan , Oliver Mason , Rafael de Andrade Moral

We analyze an interacting particle system with a Markov evolution of birth-and-death type. We have shown that a local competition mechanism (realized via a density dependent mortality) leads to a globally regular behavior of the population…

数学物理 · 物理学 2015-01-27 Dmitri Finkelshtein , Yuri Kondratiev , Oleksandr Kutoviy

The probability of the survival of the population of individuals of both sexes of given mature age, procreation rate and structure stability has been searched in the numerical experiment. The populations with long period of reproduction and…

凝聚态物理 · 物理学 2007-05-23 Kazimierz Pater

These notes provide a review of basic stochastic population models including branching processes and models of population genetics. Measure-valued population models including superprocesses and Fleming-Viot processes are also introduced…

概率论 · 数学 2017-05-11 Donald A. Dawson

Population dynamics and in particular microbial population dynamics, though they are complex but also intrinsically discrete and random, are conventionally represented as deterministic differential equations systems. We propose to revisit…

种群与进化 · 定量生物学 2014-06-02 Coralie Fritsch , Jérôme Harmand , Fabien Campillo

Clonal interference, competition between multiple co-occurring beneficial mutations, has a major role in adaptation of asexual populations. We provide a simple individual based stochastic model of clonal interference taking into account a…

概率论 · 数学 2015-05-19 Sylvain Billiard , Charline Smadi

Understanding how stochastic and non-linear deterministic processes interact is a major challenge in population dynamics theory. After a short review, we introduce a stochastic individual-centered particle model to describe the evolution in…

概率论 · 数学 2009-06-29 Regis Ferriere , Viet Chi Tran

The Ising model is of prime importance in the field of statistical mechanics. Here we show that Ising-type interactions can be realized in periodically-driven circuits of stochastic binary resistors with memory. A key feature of our…

介观与纳米尺度物理 · 物理学 2023-10-03 V. J. Dowling , Y. V. Pershin
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