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The behavior of interacting populations typically displays irregular temporal and spatial patterns that are difficult to reconcile with an underlying deterministic dynamics. A classical example is the heterogeneous distribution of plankton…

种群与进化 · 定量生物学 2009-11-13 M. H. Vainstein , J. M. Rubi , J. M. G. Vilar

Frequency dependent selection and demographic fluctuations play important roles in evolutionary and ecological processes. Under frequency dependent selection, the average fitness of the population may increase or decrease based on…

种群与进化 · 定量生物学 2015-06-23 Weini Huang , Christoph Hauert , Arne Traulsen

Spontaneous symmetry breaking plays a fundamental role in many areas of condensed matter and particle physics. A fundamental problem in ecology is the elucidation of the mechanisms responsible for biodiversity and stability. Neutral theory,…

种群与进化 · 定量生物学 2013-06-28 Claudio Borile , Miguel A. Muñoz , Sandro Azaele , Jayanth R. Banavar , Amos Maritan

We study diffusion-controlled two-species annihilation with a finite number of particles. In this stochastic process, particles move diffusively, and when two particles of opposite type come into contact, the two annihilate. We focus on the…

统计力学 · 物理学 2018-02-14 J. G. Amar , E. Ben-Naim , S. M. Davis , P. L. Krapivsky

The values of many phenomena in the Nature $z$ are determined in some discrete set of times t_n, separated by a small interval $\Delta t$ (which may also represent a coordinate, etc.). Let the $z$ value in neighbour point…

综合物理 · 物理学 2017-09-13 I. F. Ginzburg

Motivated by modeling the dynamics of a population living in a flowing medium where the environmental factors are random in space, we have studied an asymmetric variant of the one-dimensional contact process, where the quenched random…

无序系统与神经网络 · 物理学 2015-06-16 Róbert Juhász

We introduce and analyse an individual-based evolutionary model, in which a population of genetically diverse organisms compete with each other for limited resources. Through theoretical analysis and stochastic simulations, we show that the…

种群与进化 · 定量生物学 2012-11-02 Tim Rogers , Alan J. McKane , Axel G. Rossberg

A natural example of evolution can be described by a time-dependent two degrees-of-freedom Hamiltonian. We choose the case where initially the Hamiltonian derives from a general cubic potential, the linearised system has frequencies 1 and…

动力系统 · 数学 2021-11-03 Ferdinand Verhulst

All living things exhibit adaptations that enable them to survive and reproduce in the natural environment that they inhabit. From a biological standpoint, it has long been understood that adaptation comes from natural selection, whereby…

生物物理 · 物理学 2016-06-22 Nikolai Perunov , Robert Marsland , Jeremy England

Clusters appear in nature in a diversity of contexts, involving distances as long as the cosmological ones, and down to atoms and molecules and the very small nuclear size. They also appear in several other scenarios, in particular in…

种群与进化 · 定量生物学 2020-02-19 D. Bazeia , M. V. de Moraes , B. F. de Oliveira

Speciation is of fundamental importance to understanding the huge diversity of life on Earth. In contrast to current phenomenological models, we develop a biophysically motivated approach to study speciation involving the co-evolution of…

种群与进化 · 定量生物学 2015-05-18 Bhavin S. Khatri , Richard A. Goldstein

Organisms and algorithms learn probability distributions from previous observations, either over evolutionary time or on the fly. In the absence of regularities, estimating the underlying distribution from data would require observing each…

统计力学 · 物理学 2024-12-10 William Bialek , Stephanie E. Palmer , David J. Schwab

Highly-diverse ecosystems exhibit a broad distribution of population sizes and species turnover, where species at high and low abundances are exchanged over time. We show that these two features generically emerge in the fluctuating phase…

种群与进化 · 定量生物学 2024-01-09 Thibaut Arnoulx de Pirey , Guy Bunin

A central problem in population ecology is understanding the consequences of stochastic fluctuations. Analytically tractable models with Gaussian driving noise have led to important, general insights, but they fail to capture rare,…

种群与进化 · 定量生物学 2017-12-08 Brandon H. Schlomann

A celebrated and controversial hypothesis conjectures that some biological systems --parts, aspects, or groups of them-- may extract important functional benefits from operating at the edge of instability, halfway between order and…

统计力学 · 物理学 2018-08-01 Miguel A. Munoz

The well-defined but intricate course of time evolution exhibited by many naturally occurring phenomena suggests some source of dynamic order sustaining it. In spite of its obviousness as a problem, it has remained absent from the…

适应与自组织系统 · 物理学 2021-03-02 R. Herrero , J. Farjas , F. Pi , G. Orriols

Darwin's hypothesis that all extant life forms are descendants of a last common ancestor cell and diversification of life forms results from gradual mutation plus natural selection represents a mainstream view that has influenced biology…

种群与进化 · 定量生物学 2008-12-13 Shi V. Liu

Horizontal gene transfer consists in exchanging genetic materials between microorganisms during their lives. This is a major mechanism of bacterial evolution and is believed to be of main importance in antibiotics resistance. We consider a…

概率论 · 数学 2019-12-18 Nicolas Champagnat , Sylvie Méléard , Viet Chi Tran

Many complex systems exhibit extreme events far more often than expected for a normal distribution. This work examines how self-similar bursts of activity across several orders of magnitude can emerge from first principles in systems that…

物理与社会 · 物理学 2015-11-13 Felix Patzelt

Although it has been notoriously difficult to pin down precisely what it is that makes life so distinctive and remarkable, there is general agreement that its informational aspect is one key property, perhaps the key property. The unique…

适应与自组织系统 · 物理学 2012-12-20 Sara Imari Walker , Paul C. W. Davies