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Evolutionary graph theory studies the evolutionary dynamics of populations structured on graphs. A central problem is determining the probability that a small number of mutants overtake a population. Currently, Monte Carlo simulations are…

计算机科学与博弈论 · 计算机科学 2013-01-14 Paulo Shakarian , Patrick Roos , Geoffrey Moores

This paper is based on the complete classification of evolutionary scenarios for the Moran process with two strategies given by Taylor et al. (B. Math. Biol. 66(6): 1621--1644, 2004). Their classification is based on whether each strategy…

种群与进化 · 定量生物学 2018-11-27 Evandro P. Souza , Eliza M. Ferreira , Armando G. M. Neves

Hypergraphs have been a useful tool for analyzing population dynamics such as opinion formation and the public goods game occurring in overlapping groups of individuals. In the present study, we propose and analyze evolutionary dynamics on…

物理与社会 · 物理学 2023-10-16 Ruodan Liu , Naoki Masuda

Different evolutionary models are known to make disparate predictions for the success of an invading mutant in some situations. For example, some evolutionary mechanics lead to amplification of selection in structured populations, while…

种群与进化 · 定量生物学 2020-07-01 Francisco Herrerías-Azcué , Vicente Pérez-Muñuzuri , Tobias Galla

We study the fixation probability for two versions of the Moran process on the random graph $G_{n,p}$ at the threshold for connectivity. The Moran process models the spread of a mutant population in a network. Throughtout the process there…

概率论 · 数学 2025-02-17 Alan Frieze , Wesley Pegden

Evolutionary game theory is a mathematical approach to studying how social behaviors evolve. In many recent works, evolutionary competition between strategies is modeled as a stochastic process in a finite population. In this context, two…

种群与进化 · 定量生物学 2017-08-16 Christine Sample , Benjamin Allen

The well-known Isothermal Theorem was introduced in a Nature Communications article in 2005 and has since contributed to the creation of the rich field of evolutionary graph theory. The theorem states under which conditions certain…

概率论 · 数学 2024-09-12 Peter Keller , Mert Ugurlu

Near the beginning of the century, Wright and Fisher devised an elegant, mathematically tractable model of gene reproduction and replacement that laid the foundation for contemporary population genetics. The Wright-Fisher model and its…

概率论 · 数学 2013-12-23 Todd L. Parsons

The fixation probability of a mutant in the evolutionary dynamics of Moran process is calculated by the Monte-Carlo method on a few families of clique-based graphs. It is shown that the complete suppression of fixation can be realized with…

种群与进化 · 定量生物学 2018-01-17 Jeong-Ok Choi , Unjong Yu

We consider a generalized version of the birth-death (BD) and death-birth (DB) processes introduced by Kaveh, Komarova, and Kohandel (2015), in which two constant fitnesses, one for birth and the other for death, describe the selection…

概率论 · 数学 2025-12-08 Poly H. da Silva , Max O. Souza

The Moran process is a random process that models the spread of genetic mutations through graphs. If the graph is connected, the process eventually reaches "fixation", where every vertex is a mutant, or "extinction", where no vertex is a…

概率论 · 数学 2019-07-16 Leslie Ann Goldberg , John Lapinskas , David Richerby

The stage of evolution is the population of reproducing individuals. The structure of the population is know to affect the dynamics and outcome of evolutionary processes, but analytical results for generic random structures have been…

种群与进化 · 定量生物学 2014-07-10 Ben Adlam , Martin A. Nowak

We study stochastic evolutionary game dynamics in a population of finite size. Individuals in the population are divided into two dynamically evolving groups. The structure of the population is formally described by a Wright-Fisher type…

Computing the rate of evolution in spatially structured populations is difficult. A key quantity is the fixation time of a single mutant with relative reproduction rate $r$ which invades a population of residents. We say that the fixation…

种群与进化 · 定量生物学 2025-09-18 David A. Brewster , Martin A. Nowak , Josef Tkadlec

For the Moran model with strong or moderately strong selection we prove that the fluctuations around the deterministic limit of the line counting process of the ancestral selection graph converge to an Ornstein-Uhlenbeck process. To this…

概率论 · 数学 2025-12-11 Florin Boenkost , Anna-Lena Weinel

Evolutionary games on graphs describe how strategic interactions and population structure determine evolutionary success, quantified by the probability that a single mutant takes over a population. Graph structures, compared to the…

种群与进化 · 定量生物学 2017-05-08 Philipp M. Altrock , Arne Traulsen , Martin A. Nowak

Explaining the surprising generalization performance of deep neural networks is an active and important line of research in theoretical machine learning. Influential work by Arora et al. (ICML'18) showed that, noise stability properties of…

机器学习 · 计算机科学 2021-07-02 Allan Grønlund , Mikael Høgsgaard , Lior Kamma , Kasper Green Larsen

We generalize the random graph evolution process of Bohman, Frieze, and Wormald [T. Bohman, A. Frieze, and N. C. Wormald, Random Struct. Algorithms, 25, 432 (2004)]. Potential edges, sampled uniformly at random from the complete graph, are…

无序系统与神经网络 · 物理学 2011-03-31 Wei Chen , Raissa M. D'Souza

We investigate the evolutionary dynamics in directed and/or weighted networks. We study the fixation probability of a mutant in finite populations in stochastic voter-type dynamics for several update rules. The fixation probability is…

物理与社会 · 物理学 2009-03-12 Naoki Masuda , Hisashi Ohtsuki

We consider a multi-type Moran model (in continuous time) with selection and type-dependent mutation. This paper is concerned with the evolution of genealogical information forward in time. For this purpose we define and analytically…

概率论 · 数学 2015-11-19 Peter Seidel