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Hamiltonian Monte Carlo (HMC) is a widely deployed method to sample from high-dimensional distributions in Statistics and Machine learning. HMC is known to run very efficiently in practice and its popular second-order "leapfrog"…

数据结构与算法 · 计算机科学 2018-08-13 Oren Mangoubi , Nisheeth K. Vishnoi

A numerical method to implement a linearized Coulomb collision operator in the two-weight $\delta f$ Monte Carlo method for multi-ion-species neoclassical transport simulation is developed. The conservation properties and the adjointness…

A different view of Henri-Michaelis-Menten (HMM) enzyme kinetics is presented. In the first part of the paper, a simplified but useful description that stresses the cyclic nature of the catalytic process is introduced. The time-dependence…

化学物理 · 物理学 2009-05-07 Mario N. Berberan-Santos

Quantitative long-time entropic convergence and short-time regularization are established for an idealized Hamiltonian Monte Carlo chain which alternatively follows an Hamiltonian dynamics for a fixed time and then partially or totally…

概率论 · 数学 2023-06-06 Pierre Monmarché

Hot dense helium is studied with first-principles computer simulations. By combining path integral Monte Carlo and density functional molecular dynamics, a large temperature and density interval ranging from 1000 to 1000000 K and 0.4 to 5.4…

材料科学 · 物理学 2015-05-13 Burkhard Militzer

Monte Carlo (MC) dropout is one of the state-of-the-art approaches for uncertainty estimation in neural networks (NNs). It has been interpreted as approximately performing Bayesian inference. Based on previous work on the approximation of…

机器学习 · 计算机科学 2020-07-13 Joachim Sicking , Maram Akila , Tim Wirtz , Sebastian Houben , Asja Fischer

We discuss Hamiltonian Monte Carlo (HMC) and event-chain Monte Carlo (ECMC) for the one-dimensional chain of particles with harmonic interactions and benchmark them against local reversible Metropolis algorithms. While HMC achieves…

统计力学 · 物理学 2024-11-19 Werner Krauth

We show that if one uses the invariant form of the Boltzmann-Shannon continuous entropy, it is possible to obtain the generalized Pareto-Tsallis density function, using an appropriate "prior" measure m_{q}(x) and a "Boltzman constraint"…

统计力学 · 物理学 2007-05-23 F. Brouers , O. Sotolongo

Hamiltonian Monte Carlo (HMC) samples efficiently from high-dimensional posterior distributions with proposed parameter draws obtained by iterating on a discretized version of the Hamiltonian dynamics. The iterations make HMC…

统计计算 · 统计学 2019-05-03 Khue-Dung Dang , Matias Quiroz , Robert Kohn , Minh-Ngoc Tran , Mattias Villani

Theoretical predictions in high energy physics are routinely provided in the form of Monte Carlo generators. Comparisons of predictions from different programs and/or different initialization set-ups are often necessary. MC-TESTER can be…

高能物理 - 唯象学 · 物理学 2011-01-17 N. Davidson , P. Golonka , T. Przedzinski , Z. Was

We use the Maximum Entropy Method (MaxEnt) to estimate the dynamic structure factor of superfluid He-4 at T=1 K, by inverting imaginary-time density correlation functions computed by a Quantum Monte Carlo (QMC) simulation. Our procedure…

统计力学 · 物理学 2018-10-26 Youssef Kora , Massimo Boninsegni

A high-fidelity kinetic Monte Carlo (KMC) simulation method (T. Treeratanaphitak, M. Pritzker, N. M. Abukhdeir, Electrochim. Acta 121 (2014) 407--414) using the semi-empirical multi-body embedded-atom method (EAM) potential has been…

Energy-based models (EBMs) are a simple yet powerful framework for generative modeling. They are based on a trainable energy function which defines an associated Gibbs measure, and they can be trained and sampled from via well-established…

机器学习 · 计算机科学 2021-05-06 Carles Domingo-Enrich , Alberto Bietti , Eric Vanden-Eijnden , Joan Bruna

We report benchmark calculations of the energy per particle of pure neutron matter as a function of the baryon density using three independent many-body methods: Brueckner-Bethe-Goldstone, Fermi hypernetted chain/single-operator chain, and…

核理论 · 物理学 2020-04-15 M. Piarulli , I. Bombaci , D. Logoteta , A. Lovato , R. B. Wiringa

The interpretation of water line emission from existing observations and future HIFI/Herschel data requires a detailed knowledge of collisional rate coefficients. Among all relevant collisional mechanisms, the rotational (de)excitation of…

天体物理学 · 物理学 2009-11-13 A. Faure , N. Crimier , C. Ceccarelli , P. Valiron , L. Wiesenfeld , M. -L. Dubernet

In this paper, we present the solutions of the Schr\"{o}dinger equation and the thermodynamic properties of generalized hyperbolic Hulthen and Woods-Saxon potential. The eigenvalues and eigenfunctions were found using the parametric…

化学物理 · 物理学 2024-12-31 Y. M. Assimiou , S. T. Daniel , G. Issoufou , D. F. Anselme , G. Y. H. Avossevou

We give an introductory account of the recent hyperdensity functional theory for the equilibrium statistical mechanics of soft matter systems [F. Samm\"uller et al., Phys. Rev. Lett. 133, 098201 (2024); 10.1103/PhysRevLett.133.098201].…

软凝聚态物质 · 物理学 2025-02-27 Florian Sammüller , Matthias Schmidt

Koopmans-compliant functionals emerge naturally from extending the constraint of piecewise linearity of the total energy as a function of the number of electrons to each fractional orbital occupation. When applied to approximate…

材料科学 · 物理学 2015-06-19 Giovanni Borghi , Andrea Ferretti , Ngoc Linh Nguyen , Ismaila Dabo , Nicola Marzari

The dynamics of the approach to equilibrium of the hydrogen atom is investigated numerically through a Monte Carlo procedure. We show that, before approaching ionization, the hydrogen atom may live in a quasi-equilibrium state,…

统计力学 · 物理学 2007-05-23 N. M. Oliveira-Neto , E. M. F. Curado , F. D. Nobre , M. A. Rego-Monteiro

We perform a comprehensive study of a class of dark energy models - scalar field models where the effective potential can be described by a polynomial series - exploring their dynamical behavior using the method of flow equations that has…

天体物理学 · 物理学 2008-11-26 Dragan Huterer , Hiranya V. Peiris
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