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The interplay of geometrical and topological entanglement in semiflexible knotted polymer rings confined inside a spherical cavity is investigated using advanced numerical methods. By using stringent and robust algorithms for locating…

软凝聚态物质 · 物理学 2011-11-15 Luca Tubiana , Enzo Orlandini , Cristian Micheletti

The effects of entanglement in solutions and melts of unknotted ring polymers have been addressed by several theoretical and numerical studies. The system properties have been typically profiled as a function of ring contour length at fixed…

软凝聚态物质 · 物理学 2011-11-29 Angelo Rosa , Enzo Orlandini , Luca Tubiana , Cristian Micheletti

We investigate the effect of knot type on the properties of a ring polymer confined to a slit. For relatively wide slits, the more complex the knot, the more the force exerted by the polymer on the walls is decreased compared to an…

软凝聚态物质 · 物理学 2014-11-18 R. Matthews , A. A. Louis , J. M. Yeomans

In the first part of this work a summary is provided of some recent experiments and theoretical results which are relevant in the research of systems of polymer rings in nontrivial topological conformations. Next, some advances in modeling…

软凝聚态物质 · 物理学 2014-02-04 Yani Zhao , Franco Ferrari

The viscous flow of polymer chains in dense melts is dominated by topological constraints whenever the single chain contour length, N, becomes larger than the characteristic scale Ne, defining comprehensively the macroscopic rheological…

软凝聚态物质 · 物理学 2023-07-19 Mattia Alberto Ubertini , Angelo Rosa

The statistical mechanics of a long knotted collapsed polymer is determined by a free-energy with a knot-dependent subleading term, which is linked to the length of the shortest polymer that can hold such knot. The only other parameter…

统计力学 · 物理学 2014-12-01 Marco Baiesi , Enzo Orlandini , Attilio L. Stella

We study knotted polymers in equilibrium with an array of obstacles which models confinement in a gel or immersion in a melt. We find a crossover in both the geometrical and the topological behavior of the polymer. When the polymers' radius…

软凝聚态物质 · 物理学 2013-05-29 Enzo Orlandini , Attilio L. Stella , Carlo Vanderzande

Ring polymers are prevalent in natural and engineered systems, including circular bacterial DNA, crown ethers for cation chelation, and mechanical nanoswitches. The morphology and dynamics of ring polymers are governed by the chemistry and…

化学物理 · 物理学 2018-02-07 Jiang Wang , Andrew Ferguson

The interplay of topological constraints and Coulomb interactions in static and dynamic properties of charged polymers is investigated by numerical simulations and scaling arguments. In the absence of screening, the long-range interaction…

统计力学 · 物理学 2009-11-07 Paul G. Dommersnes , Yacov Kantor , Mehran Kardar

We discuss the entropy of a circular polymer under a topological constraint. We call it the {\it topological entropy} of the polymer, in short. A ring polymer does not change its topology (knot type) under any thermal fluctuations. Through…

统计力学 · 物理学 2009-11-07 Miyuki K. Shimamura , Tetso Deguchi

Topological constraints (TCs) between polymers determine the behaviour of complex fluids such as creams, oils and plastics. Most of the polymer solutions used every day life employ linear chains; their behaviour is accurately captured by…

软凝聚态物质 · 物理学 2020-10-07 Fabio Landuzzi , Takenobu Nakamura , Davide Michieletto , Takahiro Sakaue

We investigate the effects of topological constraints (entanglements) on two dimensional polymer loops in the dense phase, and at the collapse transition (Theta point). Previous studies have shown that in the dilute phase the entangled…

软凝聚态物质 · 物理学 2009-11-10 Andreas Hanke , Ralf Metzler , Paul G. Dommersnes , Yacov Kantor , Mehran Kardar

We use Brownian dynamics simulations and advanced topological profiling methods to characterize the out-of-equilibrium evolution of self-entanglement in linear polymers confined into nano-channels and under periodic compression. We…

软凝聚态物质 · 物理学 2020-06-22 Davide Michieletto , Enzo Orlandini , Matthew S Turner , Cristian Micheletti

Elucidating the physics of a concentrated suspension of ring polymers, or of an ensemble of ring polymers in a complex environment, is an important outstanding question in polymer physics. Many of the characteristic features of these…

软凝聚态物质 · 物理学 2017-08-09 Davide Michieletto , Enzo Orlandini , Davide Marenduzzo , Matthew S. Turner

Topological entanglements are abundant, and often detrimental, in polymeric systems in biology and materials science. Here we theoretically investigate the topological simplification of knots by diffusing slip-links (SLs), which may…

软凝聚态物质 · 物理学 2020-11-02 Andrea Bonato , Davide Marenduzzo , Davide Michieletto

We give two different, statistically consistent definitions of the length l of a prime knot tied into a polymer ring. In the good solvent regime the polymer is modelled by a self avoiding polygon of N steps on cubic lattice and l is the…

统计力学 · 物理学 2015-06-25 B. Marcone , E. Orlandini , A. L. Stella , F. Zonta

We present a computer simulation study of the compact self-avoiding loops as regards their length and topological state. We use a Hamiltonian closed path on the cubic-shaped segment of a 3D cubic lattice as a model of a compact polymer. The…

软凝聚态物质 · 物理学 2007-05-23 R. C. Lua , N. T. Moore , A. Yu. Grosberg

We use numerical simulations to study tangentially active flexible ring polymers with different knot topologies. Simple, unknotted active rings display a transition from an extended phase to a collapsed one upon increasing the degree of…

软凝聚态物质 · 物理学 2025-08-01 Davide Breoni , Emanuele Locatelli , Luca Tubiana

One measure of geometrical complexity of a spatial curve is the number of crossings in a planar projection of the curve. For $N$-noded ring polymers with a fixed knot type, we evaluate numerically the average of the crossing number over…

软凝聚态物质 · 物理学 2016-08-31 Miyuki K. Shimamura , Tetsuo Deguchi

We study the emerging self-organization in active ring suspensions, focusing on how the rings' orientational order and geometric entanglement vary with density and spatial confinement. To quantify entanglement, we introduce the wrapping…

软凝聚态物质 · 物理学 2025-07-31 Juan Pablo Miranda , Emanuele Locatelli , Cristian Micheletti , Demian Levis , Chantal Valeriani
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