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We study the tailoring of structured random graph ensembles to real networks, with the objective of generating precise and practical mathematical tools for quantifying and comparing network topologies macroscopically, beyond the level of…

无序系统与神经网络 · 物理学 2015-05-13 A. Annibale , A. C. C. Coolen , L. P. Fernandes , F. Fraternali , J. Kleinjung

Generalised degrees provide a natural bridge between local and global topological properties of networks. We define the generalised degree to be the number of neighbours of a node within one and two steps respectively. Tailored random graph…

无序系统与神经网络 · 物理学 2013-09-17 Ekaterina S. Roberts , Anthonius C. C. Coolen

We calculate explicit formulae for the Shannon entropies of several families of tailored random graph ensembles for which no such formulae were as yet available, in leading orders in the system size. These include bipartite graph ensembles…

无序系统与神经网络 · 物理学 2014-04-24 Ekaterina Roberts , Ton Coolen

First principle network models are crucial to make sense of the intricate topology of real complex networks. While modeling efforts have been quite successful in undirected networks, generative models for networks with asymmetric…

物理与社会 · 物理学 2023-02-20 Antoine Allard , M. Ángeles Serrano , Marián Boguñá

We introduce the (private) entropy of a directed graph (in a new network coding sense) as well as a number of related concepts. We show that the entropy of a directed graph is identical to its guessing number and can be bounded from below…

组合数学 · 数学 2007-11-28 Soren Riis

In recent years, Graph Neural Networks (GNNs) have made significant advances in processing structured data. However, most of them primarily adopted a model-centric approach, which simplifies graphs by converting them into undirected formats…

机器学习 · 计算机科学 2024-12-12 Henan Sun , Xunkai Li , Daohan Su , Junyi Han , Rong-Hua Li , Guoren Wang

Stochastic network influences complicate graph filter design by producing uncertainty in network iteration matrix eigenvalues, the points at which the graph filter response is defined. While joint statistics for the eigenvalues typically…

信号处理 · 电气工程与系统科学 2018-03-01 Stephen Kruzick , José M. F. Moura

Two different types of directed networks are investigated, transcriptional regulation networks and neural networks. The directed network structure are studied and also shown to reflect the different processes taking place on the networks.…

无序系统与神经网络 · 物理学 2016-08-16 Andreas Grönlund

Biological systems are driven by intricate interactions among the complex array of molecules that comprise the cell. Many methods have been developed to reconstruct network models of those interactions. These methods often draw on large…

分子网络 · 定量生物学 2018-06-29 Marieke Lydia Kuijjer , Matthew Tung , GuoCheng Yuan , John Quackenbush , Kimberly Glass

Topological metrics of graphs provide a natural way to describe the prominent features of various types of networks. Graph metrics describe the structure and interplay of graph edges and have found applications in many scientific fields. In…

数据结构与算法 · 计算机科学 2018-06-21 Loukianos Spyrou , Javier Escudero

We consider spectral methods that uncover hidden structures in directed networks. We establish and exploit connections between node reordering via (a) minimizing an objective function and (b) maximizing the likelihood of a random graph…

社会与信息网络 · 计算机科学 2021-10-12 Xue Gong , Desmond John Higham , Konstantinos Zygalakis

The structure of a complex network plays a crucial role in determining its dynamical properties. In this work, we show that the the degree to which a network is directed and hierarchically organised is closely associated with the degree to…

We study the family of network models derived by requiring the expected properties of a graph ensemble to match a given set of measurements of a real-world network, while maximizing the entropy of the ensemble. Models of this type play the…

统计力学 · 物理学 2009-11-10 Juyong Park , M. E. J. Newman

We consider the problem of graph generation guided by network statistics, i.e., the generation of graphs which have given values of various numerical measures that characterize networks, such as the clustering coefficient and the number of…

社会与信息网络 · 计算机科学 2023-03-02 Jérôme Kunegis , Jun Sun , Eiko Yoneki

We explore pseudometrics for directed graphs in order to better understand their topological properties. The directed flag complex associated to a directed graph provides a useful bridge between network science and topology. Indeed, it has…

Traditional graph analysis focuses on nodes and edges, that is, pairwise relationships. Yet many real-world networks, including biological, social, and communication networks, involve higher-order relationships in which multiple nodes…

综合数学 · 数学 2026-05-15 Heitor Baldo , Luiz A. Baccalá , André Fujita , Koichi Sameshima

Although asymptotic analyses of undirected network models based on degree sequences have started to appear in recent literature, it remains an open problem to study statistical properties of directed network models. In this paper, we…

统计理论 · 数学 2016-01-13 Ting Yan , Chenlei Leng , Ji Zhu

Many real-world networks exhibit correlations between the node degrees. For instance, in social networks nodes tend to connect to nodes of similar degree. Conversely, in biological and technological networks, high-degree nodes tend to be…

离散数学 · 计算机科学 2015-09-30 Kevin E. Bassler , Charo I. Del Genio , Péter L. Erdős , István Miklós , Zoltán Toroczkai

Exploring statistics of locally connected subgraph patterns (also known as network motifs) has helped researchers better understand the structure and function of biological and online social networks (OSNs). Nowadays the massive size of…

社会与信息网络 · 计算机科学 2014-03-28 Pinghui Wang , John C. S. Lui , Bruno Ribeiro , Don Towsley , Junzhou Zhao , Xiaohong Guan

In recent years, many large directed networks such as online social networks are collected with the help of powerful data engineering and data storage techniques. Analyses of such networks attract significant attention from both the…

社会与信息网络 · 计算机科学 2025-08-01 Yunxiang Yan , Meng Jiang
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