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A fascinating and open question challenging biochemistry, physics and even geometry is the presence of highly regular motifs such as alpha-helices in the folded state of biopolymers and proteins. Stimulating explanations ranging from…

统计力学 · 物理学 2009-10-31 Amos Maritan , Cristian Micheletti , Jayanth R. Banavar

Topological theories have established a new set of rules that govern the transport properties in a wide variety of wave-mechanical settings. In a marked departure from the established approaches that induce Floquet topological phases by…

We study the elasticity of fibrous materials composed of generalized stiff polymers. It is shown that in contrast to cellular foam-like structures affine strain fields are generically unstable. Instead, a subtle interplay between the…

软凝聚态物质 · 物理学 2007-05-23 Claus Heussinger , Erwin Frey

Atomic-scale helices exist as motifs for several material lattices. We examine a tight-binding model for a single one-dimensional monatomic chain with a p-orbital basis coiled into a helix. A topologically nontrivial phase emerging from…

介观与纳米尺度物理 · 物理学 2017-10-04 Pengke Li , Jay D. Sau , Ian Appelbaum

Solid interfaces have intrinsic elasticity. However, in most experiments, this is obscured by bulk stresses. Through microscopic observations of the contact-line geometry of a partially wetting droplet on an anisotropically stretched…

软凝聚态物质 · 物理学 2017-11-29 Qin Xu , Robert W. Style , Eric R. Dufresne

Elastic properties and internal states of isotropic sphere packings are studied by numerical simulations. Several numerical protocols to assemble dense configurations are compared. One, which imitates experiments with lubricated contacts,…

材料科学 · 物理学 2009-01-16 Ivana Agnolin , Jean-Noël Roux

We investigate with numerical simulations the influence of topology and stiffness on macroscopic rheological properties of polymer melts consisting of unknotted, knotted or concatenated rings. While melts of flexible, knotted oligomer rings…

软凝聚态物质 · 物理学 2024-10-18 Ranajay Datta , Peter Virnau

Despite being governed by the familiar laws of Hookean mechanics, elastic shells patterned with an internal structure (i.e. metashells) exhibit a wealth of unusual mechanical properties with no counterparts in unstructured materials. Here I…

软凝聚态物质 · 物理学 2025-02-17 Luca Giomi

We perform an exact enumeration study of polymers formed from a (quenched) random sequence of charged monomers $\pm q_0$, restricted to a 2-dimensional square lattice. Monomers interact via a logarithmic (Coulomb) interaction. We study the…

软凝聚态物质 · 物理学 2009-10-30 Eilon Brenner , Yacov Kantor

The structural properties of dense random packings of identical hard spheres (HS) are investigated. The bond order parameter method is used to obtain detailed information on the local structural properties of the system for different…

软凝聚态物质 · 物理学 2015-05-27 B. A. Klumov , S. A. Khrapak , G. E. Morfill

A simple lattice model for proteins that allows for distinct sizes of the amino acids is presented. The model is found to lead to a significant number of conformations that are the unique ground state of one or more sequences or encodable.…

统计力学 · 物理学 2009-10-30 Cristian Micheletti , Jayanth R. Banavar , Amos Maritan , Flavio Seno

Confined fluids display complex behavior due to layering and local packing. Here, we disentangle these effects by confining a hard-sphere fluid to the surface of a cylinder, such the circumference extends only over a few particle diameters.…

软凝聚态物质 · 物理学 2020-04-23 Charlotte F. Petersen , Lukas Schrack , Thomas Franosch

The bulk-boundary correspondence is a generic feature of topological states of matter, reflecting the intrinsic relation between topological bulk and boundary states. For example, robust edge states propagate along the edges and corner…

介观与纳米尺度物理 · 物理学 2022-11-15 Ai-Lei He , Wei-Wei Luo , Yuan Zhou , Yi-Fei Wang , Hong Yao

Topological properties of solid states have sparked considerable recent interest due to their importance in the physics of lattices with a non-trivial basis and their potential in the design of novel materials. Here we describe an…

应用物理 · 物理学 2020-02-19 Henning U. Voss , Douglas J. Ballon

We investigate topological properties of density matrices motivated by the question to what extent phenomena like topological insulators and superconductors can be generalized to mixed states in the framework of open quantum systems. The…

量子物理 · 物理学 2015-05-01 Jan Carl Budich , Sebastian Diehl

We explore the effect of an attractive interaction between parallel-aligned polymers, which are perpendicularly grafted on a substrate. Such an attractive interaction could be due to, e.g., reversible cross-links. The competition between…

软凝聚态物质 · 物理学 2013-10-08 Panayotis Benetatos , Eugene M. Terentjev , Annette Zippelius

Topological defects are crucial to the thermodynamics and structure of condensed matter systems. For instance, when incorporated into crystalline membranes like graphene, disclinations with positive and negative topological charge…

软凝聚态物质 · 物理学 2018-08-29 Isaac R. Bruss , Gregory M. Grason

The statistical mechanics of a long knotted collapsed polymer is determined by a free-energy with a knot-dependent subleading term, which is linked to the length of the shortest polymer that can hold such knot. The only other parameter…

统计力学 · 物理学 2014-12-01 Marco Baiesi , Enzo Orlandini , Attilio L. Stella

Topological phases support edge states that can be robust to material deformations and other perturbations. While well-studied in quantum systems, topological phases have also been observed in stochastic and biochemical systems, yet it…

统计力学 · 物理学 2026-04-06 Ziyin Xiong , Aleksandra Nelson , Evelyn Tang

In systems characterized by a rough potential energy landscape, local energetic minima and saddles define a network of metastable states whose topology strongly influences the dynamics. Changes in temperature, causing the merging and…

软凝聚态物质 · 物理学 2009-07-24 Marco Baiesi , Lorenzo Bongini , Lapo Casetti , Lorenzo Tattini