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It is well-known that computing a Markov basis for a discrete loglinear model is very hard in general. Thus, we focus on connecting tables in a fiber via a subset of a Markov basis and in this paper, we consider connecting tables if we…

统计方法学 · 统计学 2023-01-24 Ruriko Yoshida , David Barnhill

Minimal Markov bases of configurations of integer vectors correspond to minimal binomial generating sets of the assocciated lattice ideal. We give necessary and sufficient conditions for the elements of a minimal Markov basis to be (a)…

交换代数 · 数学 2015-10-09 Hara Charalambous , Apostolos Thoma , Marius Vladoiu

In this paper we study the computation of Markov bases for contingency tables whose cell entries have an upper bound. In general a Markov basis for unbounded contingency table under a certain model differs from a Markov basis for bounded…

组合数学 · 数学 2010-01-19 Fabio Rapallo , Ruriko Yoshida

We present a computational approach for generating Markov bases for multi-way contingency tables whose cells counts might be constrained by fixed marginals and by lower and upper bounds. Our framework includes tables with structural zeros…

统计计算 · 统计学 2014-08-21 Adrian Dobra

We show that the complexity of the Markov bases of multidimensional tables stabilizes eventually if a single table dimension is allowed to vary. In particular, if this table dimension is beyond a computable bound, the Markov bases consist…

组合数学 · 数学 2008-04-18 Serkan Hosten , Seth Sullivant

An intensive line of research on fixed parameter tractability of integer programming is focused on exploiting the relation between the sparsity of a constraint matrix $A$ and the norm of the elements of its Graver basis. In particular,…

离散数学 · 计算机科学 2023-06-21 Marcin Brianski , Martin Koutecky , Daniel Kral , Kristyna Pekarkova , Felix Schroder

It has been well-known that for two-way contingency tables with fixed row sums and column sums the set of square-free moves of degree two forms a Markov basis. However when we impose an additional constraint that the sum of a subtable is…

组合数学 · 数学 2009-04-27 Hisayuki Hara , Akimichi Takemura , Ruriko Yoshida

To calibrate Fourier analysis of $S_5$ ranking data by Markov chain Monte Carlo techniques, a set of moves (Markov basis) is needed. We calculate this basis, and use it to provide a new statistical analysis of two data sets. The calculation…

交换代数 · 数学 2007-06-13 Persi Diaconis , Nicholas Eriksson

To evaluate a fitting of a statistical model to given data, calculating a conditional $p$ value by a Markov chain Monte Carlo method is one of the effective approaches. For this purpose, a Markov basis plays an important role because it…

统计方法学 · 统计学 2017-02-06 Satoshi Aoki , Takayuki Hibi

We consider the connectivity of fiber graphs with respect to Gr\"obner basis and Graver basis moves. First, we present a sequence of fiber graphs using moves from a Gr\"obner basis and prove that their edge-connectivity is lowest possible…

组合数学 · 数学 2015-01-20 Raymond Hemmecke , Tobias Windisch

In this paper we consider exact tests of a multiple logistic regression, where the levels of covariates are equally spaced, via Markov beses. In usual application of multiple logistic regression, the sample size is positive for each…

统计理论 · 数学 2010-02-18 Hisayuki Hara , Akimichi Takemura , Ruriko Yoshida

We present a new algorithm for computing a truncated Markov basis of a lattice. In general, this new algorithm is faster than existing methods. We then extend this new algorithm so that it solves the linear integer feasibility problem with…

最优化与控制 · 数学 2007-05-23 Peter N. Malkin

In this paper, we introduce the fundamental notion of a Markov basis, which is one of the first connections between commutative algebra and statistics. The notion of a Markov basis is first introduced by Diaconis and Sturmfels (1998) for…

统计理论 · 数学 2016-07-27 Satoshi Aoki

In this paper we characterize the unique graph whose algebraic connectivity is minimum among all connected graphs with given order and fixed matching number or edge covering number, and present two lower bounds for the algebraic…

组合数学 · 数学 2017-09-07 Jing Xu , Yi-Zheng Fan , Ying-Ying Tan

We study how to lift Markov bases and Gr\"obner bases along linear maps of lattices. We give a lifting algorithm that allows to compute such bases iteratively provided a certain associated semigroup is normal. Our main application is the…

交换代数 · 数学 2015-07-28 Johannes Rauh , Seth Sullivant

Assuming sufficiently many terms of a n-dimensional table defined over a field are given, we aim at guessing the linear recurrence relations with either constant or polynomial coefficients they satisfy. In many applications, the table terms…

符号计算 · 计算机科学 2021-11-19 Jérémy Berthomieu , Mohab Safey El Din

A special class of braids, called woven, is introduced and it is shown that every conjugation class of the braid group contains woven braids. In consequence, links can be presented as plats or closures of woven braids. Restricting on knots,…

q-alg · 数学 2008-02-03 Jan A. Kneissler

The methodology of Markov basis initiated by Diaconis and Sturmfels(1998) stimulated active research on Markov bases for more than ten years. It also motivated improvements of algorithms for Grobner basis computation for toric ideals, such…

统计理论 · 数学 2011-09-02 Hisayuki Hara , Satoshi Aoki , Akimichi Takemura

Many data we collect today are in tabular form, with rows as records and columns as attributes associated with each record. Understanding the structural relationship in tabular data can greatly facilitate the data science process.…

数据结构与算法 · 计算机科学 2020-09-09 Jin Cao , Yibo Zhao , Linjun Zhang , Jason Li

In this paper we give an explicit and algorithmic description of Graver basis for the toric ideal associated with a simple undirected graph and apply the basis for testing the beta model of random graphs by Markov chain Monte Carlo method.

统计理论 · 数学 2013-01-11 Mitsunori Ogawa , Hisayuki Hara , Akimichi Takemura
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