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In most models of the spread of disease over contact networks it is assumed that the probabilities per unit time of disease transmission and recovery from disease are constant, implying exponential distributions of the time intervals for…

物理与社会 · 物理学 2010-07-23 Brian Karrer , M. E. J. Newman

The COVID-19 pandemic highlighted the need to improve the modeling, estimation, and prediction of how infectious diseases spread. SEIR-like models have been particularly successful in providing accurate short-term predictions. This study…

种群与进化 · 定量生物学 2024-12-31 Jorge P. Zubelli , Jennifer Loria , Vinicius V. L. Albani

Compartmental models like the Susceptible-Infected-Recovered (SIR)\cite{Kermack1927} and its extensions such as the Susceptible-Exposed-Infected-Recovered (SEIRS)\cite{Ottar2020,Ignazio2021,Grimm2021,Paoluzzi2021} are commonly used to model…

种群与进化 · 定量生物学 2025-07-14 Kasturi Banerjee , Subhankar Ray , Jayalakshmi Shamanna

Transmission rates are key in understanding the spread of infectious diseases. Using the framework of compartmental models, we introduce a simple method that enables us to reconstruct time series of transmission rates directly from…

定量方法 · 定量生物学 2016-05-06 Alexander Lange

The viral load is known to be a chief predictor of the risk of transmission of infectious diseases. In this work, we investigate the role of the individuals' viral load in the disease transmission by proposing a new…

适应与自组织系统 · 物理学 2023-03-29 Rossella Della Marca , Nadia Loy , Andrea Tosin

Throughout the course of an epidemic, the rate at which disease spreads varies with behavioral changes, the emergence of new disease variants, and the introduction of mitigation policies. Estimating such changes in transmission rates can…

统计方法学 · 统计学 2022-11-29 Jenny Huang , Raphaël Morsomme , David Dunson , Jason Xu

Throughout human history, epidemics have been a constant presence. Understanding their dynamics is essential to predict scenarios and make substantiated decisions. Mathematical models are powerful tools to describe an epidemic behavior.…

系统与控制 · 电气工程与系统科学 2024-07-26 Walter HMendes aselein , Diego Eckhard

Probabilistic models for infectious disease dynamics are useful for understanding the mechanism underlying the spread of infection. When the likelihood function for these models is expensive to evaluate, traditional likelihood-based…

统计方法学 · 统计学 2013-02-18 Roman Jandarov , Murali Haran , Ottar Bjørnstad , Bryan Grenfell

The SIR model is used extensively in the field of epidemiology, in particular, for the analysis of communal diseases. One problem with SIR and other existing models is that they are tailored to random or Erdos type networks since they do…

社会与信息网络 · 计算机科学 2014-10-22 M. S. S. Khan

In this paper, we conduct mathematical and numerical analyses to address the following crucial questions for COVID-19: (Q1) Is it possible to contain COVID-19? (Q2) When will be the peak and the end of the epidemic? (Q3) How do the…

种群与进化 · 定量生物学 2020-09-22 Yi-Cheng Chen , Ping-En Lu , Cheng-Shang Chang , Tzu-Hsuan Liu

A generalisation of the Susceptible-Infectious model is made to include a time-dependent transmission rate, which leads to a close analytical expression in terms of a logistic function. The solution can be applied to any continuous function…

物理与社会 · 物理学 2020-10-08 L. Arturo Urena-Lopez , Alma X. Gonzalez-Morales

The coronavirus pandemic has rapidly evolved into an unprecedented crisis. The susceptible-infectious-removed (SIR) model and its variants have been used for modeling the pandemic. However, time-independent parameters in the classical…

种群与进化 · 定量生物学 2020-09-09 Hyokyoung G. Hong , Yi Li

In contrast to the common assumption in epidemic models that the rate of infection between individuals is constant, in reality, an individual's viral load determines their infectiousness. We compare the average and individual reproductive…

种群与进化 · 定量生物学 2021-12-07 Nicholas Landry

Since 1927, until recently, models describing the spread of disease have mostly been of the SIR-compartmental type, based on the assumption that populations are homogeneous and well-mixed. The focus of these models have typically been on…

物理与社会 · 物理学 2014-07-23 Lara Goscé , David A W Barton , Anders Johansson

We study the spread of susceptible-infected-recovered (SIR) infectious diseases where an individual's infectiousness and probability of recovery depend on his/her "age" of infection. We focus first on early outbreak stages when stochastic…

种群与进化 · 定量生物学 2009-05-14 Joel Miller , Bahman Davoudi , Rafael Meza , Anja Slim , Babak Pourbohloul

We present an exact analytical solution to a one-dimensional model of the Susceptible-Infected-Recovered (SIR) epidemic type, with infection rates dependent on nearest-neighbor occupations. We use a quantum mechanical approach, transforming…

统计力学 · 物理学 2015-05-30 H. Thomas Williams , Irina Mazilu , Dan Mazilu

Stochastic epidemic models can estimate infection and removal rates, and derived quantities such as the basic reproductive number ($R_0$), when both infection and removal times are observed. In practice, however, removal times are often…

统计方法学 · 统计学 2026-03-24 Seth D. Temple , Jonathan Terhorst

In this paper, we propose a new real-time differential virus transmission model, which can give more accurate and robust short-term predictions of COVID-19 transmitted infectious disease with benefits of near-term trend projection.…

种群与进化 · 定量生物学 2020-05-05 Sheldon X. D. Tan , Liang Chen

The effect of spatial correlations on the spread of infectious diseases was investigated using a stochastic SIR (Susceptible-Infective-Recovered) model on complex networks. It was found that in addition to the reduction of the effective…

种群与进化 · 定量生物学 2007-05-23 J. Verdasca , M. M. Telo da Gama , A. Nunes , N. R. Bernardino , J. M. Pacheco , M. C. Gomes

We define data analyses to monitor a change in R, the average number of secondary cases caused by a typical infected individual. The input dataset consists of incident cases partitioned into outbreaks, each initiated from a single index…

种群与进化 · 定量生物学 2016-04-27 Pavel Polyakov , Romulus Breban
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