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Viral infection requires the binding of receptors on the target cell membrane to glycoproteins, or ``spikes,'' on the viral membrane. The initial entry is usually classified as fusogenic or endocytotic. However, binding of viral spikes to…

亚细胞过程 · 定量生物学 2015-06-26 Tom Chou

The present study focuses on the receptor driven endocytosis typical of viral entry into a cell. A locally increased density of receptors at the time of contact between the cell and the virus is necessary in this case. The virus is…

细胞行为 · 定量生物学 2021-01-28 T. Wiegold , S. Klinge , R. P. Gilbert , G. A. Holzapfel

Receptor-mediated endocytosis is an ubiquitous process through which cells internalize biological or synthetic nanoscale objects, including viruses, unicellular parasites, and nanomedical vectors for drug or gene delivery. In passive…

生物物理 · 物理学 2018-09-19 Lorenzo Di Michele , Pritam Kumar Jana , Bortolo Matteo Mognetti

Influenza viruses enter a cell via endocytosis after binding to the surface. During the endosomal journey, acidification triggers a conformational change of the virus spike protein hemagglutinin (HA) that results in escape of the viral…

亚细胞过程 · 定量生物学 2015-10-22 Thibault Lagache , Christian Sieben , Tim Meyer , Andreas Herrmann , David Holcman

Nanoparticles, such as viruses, can enter cells via endocytosis. During endocytosis, the cell surface wraps around the nanoparticle to effectively eat it. Prior focus has been on how nanoparticle size and shape impacts endocytosis. However,…

软凝聚态物质 · 物理学 2023-01-26 Sarthak Gupta , Christian D. Santangelo , Alison E. Patteson , J. M. Schwarz

Phagocytosis and receptor-mediated endocytosis are vitally important particle uptake mechanisms in many cell types, ranging from single-cell organisms to immune cells. In both processes, engulfment by the cell depends critically on both…

细胞行为 · 定量生物学 2016-06-02 David M. Richards , Robert G. Endres

Multiple mechanisms in the HIV lifecycle play a role in its ability to evade therapy and become a chronic, difficult-to-treat infection. Within its major cellular target, the activated T cell, many steps occur between viral entry and viral…

细胞行为 · 定量生物学 2017-12-04 Jayodita C. Sanghvi , Don Mai , Adam P. Arkin , David V. Schaffer

Virus entry is a multistep process that triggers a variety of cellular pathways interconnecting into a complex network, yet the molecular complexity of this network remains largely unsolved. Here, by employing systems biology approach, we…

分子网络 · 定量生物学 2011-05-17 Anyou Wang , Hong Li

Internalization of particles by cells plays a crucial role for adsorbing nutrients and fighting infection. Endocytosis is one of the most important mechanisms of the particles uptake which encompass multiple pathways. Although endocytosis…

软凝聚态物质 · 物理学 2020-01-28 Amir Khosravanizadeh , Pierre Sens , Farshid Mohammad-Rafiee

Certain retroviruses, including HIV, insert their DNA in a non-random fraction of the host genome via poorly understood selection mechanisms. Here, we develop a biophysical model for retroviral integrations as stochastic and…

亚细胞过程 · 定量生物学 2019-03-06 Davide Michieletto , Marina Lusic , Davide Marenduzzo , Enzo Orlandini

We present a new modeling approach for G protein coupled receptors signaling systems, that take into account the compartmentalization of receptors and their effectors, both at plasma membrane and in dynamic intra-cellular vesicles called…

偏微分方程分析 · 数学 2023-05-23 Claire Alamichel , Juan Calvo , Erwan Hingant , Saoussen Latrach , Nathan Quiblier , Romain Yvinec

How is the progression of a virus influenced by properties intrinsic to individual cells? We address this question by studying the susceptibility of cells infected with two strains of the human respiratory syncytial virus (RSV-A and RSV-B)…

统计方法学 · 统计学 2014-07-15 Joshua Goldstein , Murali Haran , Ivan Simeonov , John Fricks , Francesca Chiaromonte

Simple RNA viruses self-assemble spontaneously and encapsulate their genome into a shell called the capsid. This process is mainly driven by the attractive electrostatic interaction between the positive charges on capsid proteins and the…

生物物理 · 物理学 2022-02-22 Sanaz Panahandeh , Siyu Li , Bogdan Dragnea , Roya Zandi

Viral fusion proteins are attached to the membrane of enveloped viruses (a group that includes Coronaviruses, Dengue, HIV and Influenza) and catalyze fusion between the viral and host membranes, enabling the virus to insert its genetic…

定量方法 · 定量生物学 2021-06-25 Pedro Moreira , Ana Marta Sequeira , Sara Pereira , Rúben Rodrigues , Miguel Rocha , Diana Lousa

Introduction. Can the infection due to the human immunodeficiency virus type 1 induce a change in the differentiation status or process in T cells?. Methods. We will consider two stochastic Markov chain models, one which will describe the…

分子网络 · 定量生物学 2021-02-09 Alfonso Vivanco-Lira , José-Raúl Nieto-Saucedo

Cellular uptake through the lipid membranes plays an important role in adsorbing nutrients and fighting infection and can be used for drug delivery and nanomedicine developments. Endocytosis is one of the known pathways of the cellular…

软凝聚态物质 · 物理学 2022-11-03 Amir Khosravanizadeh , Pierre Sens , Farshid Mohammad-Rafiee

A certain class of viruses replicates inside a cell if they can enter the nucleus through one of many small target pores, before being permanently trapped or degraded. We adopt for viral motion a switching stochastic process model and we…

亚细胞过程 · 定量生物学 2016-07-20 Thibault Lagache , David Holcman

The interaction between nano- or micro-sized particles and cell membranes is of crucial importance in many biological and biomedical applications such as drug and gene delivery to cells and tissues. During their cellular uptake, the…

Oncolytic virotherapy, utilizing genetically modified viruses to combat cancer and trigger anti-cancer immune responses, has garnered significant attention in recent years. In our previous work arXiv:2305.12386, we developed a stochastic…

种群与进化 · 定量生物学 2026-04-23 David Morselli , Marcello E. Delitala , Adrianne L. Jenner , Federico Frascoli

Understanding and manipulating the interactions between foreign bodies and cell membranes during endo- and phagocytosis is of paramount importance, not only for the fate of living cells but also for numerous biomedical applications. This…

软凝聚态物质 · 物理学 2023-12-06 Stijn van der Ham , Jaime Agudo-Canalejo , Hanumantha Rao Vutukuri
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