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Animal morphogenesis often involves significant shape changes of epithelial tissue sheets. Great progress has been made in understanding the underlying cellular driving forces and their coordination through biomechanical feedback loops.…

软凝聚态物质 · 物理学 2024-09-23 Nikolas H. Claussen , Fridtjof Brauns

We have developed a two dimensional stochastic molecular dynamics model for the description of intra cellular collective motion of bio motors, in particular Kinesins, on a microtubular track. The model is capable or reproducing the…

软凝聚态物质 · 物理学 2010-06-22 Yousef Jamali , M. Ebrahim Foulaadvand , H. Rafii Tabar

Cell-cell adhesion is one the most fundamental mechanisms regulating collective cell migration during tissue development, homeostasis and repair, allowing cell populations to self-organize and eventually form and maintain complex tissue…

细胞行为 · 定量生物学 2022-11-16 Carles Falcó , Ruth E. Baker , José A. Carrillo

Tip-driven growth processes underlie the development of many plants. To date, tip-driven growth processes have been modelled as an elongating path or series of segments without taking into account lateral expansion during elongation.…

生物物理 · 物理学 2014-01-24 Alexander Bucksch , Greg Turk , Joshua S. Weitz

Cell migration is an indispensable physiological and pathological process for normal tissue development and cancer metastasis, which is greatly regulated by intracellular signal pathways and extracellular microenvironment (ECM). However,…

生物物理 · 物理学 2020-10-27 Yanping Liu , Yang Jiao , Guoqiang Li , Gao Wang , Jingru Yao , Guo Chen , Silong Lou , Jianwei Shuai , Liyu Liu

A growing body of evidence suggests that the structure of mitochondrial networks is poised near criticality, an intermediate regime lying in between order and disorder. Such description fits well with the idea that biological systems, in…

生物物理 · 物理学 2020-11-02 Nahuel Zamponi , Emiliano Zamponi , Sergio A Cannas , Dante R Chialvo

Understanding the mechanisms of interactions within cells, tissues, and organisms is crucial to driving developments across biology and medicine. Mathematical modeling is an essential tool for simulating biological systems and revealing…

分子网络 · 定量生物学 2024-08-13 Lingxia Qiao , Ali Khalilimeybodi , Nathaniel J Linden-Santangeli , Padmini Rangamani

The migratory dynamics of cells in physiological processes, ranging from wound healing to cancer metastasis, rely on contact-mediated cell-cell interactions. These interactions play a key role in shaping the stochastic trajectories of…

This paper develops a generative statistical model for representing, modeling, and comparing the morphological evolution of biological cells undergoing motility. It uses the elastic shape analysis to separate cell kinematics (overall…

In this work we approach cell migration under a large-scale assumption, so that the system reduces to a particle in motion. Unlike classical particle models, the cell displacement results from its internal activity: the cell velocity is a…

细胞行为 · 定量生物学 2018-08-02 Christèle Etchegaray , Nicolas Meunier

In this paper, we consider three non-linear kinetic partial differential equations that emerge in the modeling of motion of rod-shaped cells such as myxobacteria. This motion is characterized by nematic alignment with neighboring cells,…

偏微分方程分析 · 数学 2024-01-11 Patrick Murphy , Oleg Igoshin , Misha Perepelitsa , Ilya Timofeyev

Living cells respond to mechanical changes in the matrix surrounding them by applying contractile forces that are in turn transmitted to distant cells. We calculate the mechanical work that each cell performs in order to deform the matrix,…

软凝聚态物质 · 物理学 2021-08-17 Chaviva Sirote , Yair Shokef

In cells, cytoskeletal filament networks are responsible for cell movement, growth, and division. Filaments in the cytoskeleton are driven and organized by crosslinking molecular motors. In reconstituted cytoskeletal systems, motor activity…

Proximity networks are time-varying graphs representing the closeness among humans moving in a physical space. Their properties have been extensively studied in the past decade as they critically affect the behavior of spreading phenomena…

物理与社会 · 物理学 2019-11-28 Fragkiskos Papadopoulos , Marco Antonio Rodríguez Flores

Angiogenesis is a key process in the tumoral growth which allows the cancerous tissue to impact on its vasculature in order to improve the nutrient's supply and the metastatic process. In this paper, we introduce a model for the density of…

偏微分方程分析 · 数学 2010-09-16 Sebastien Benzekry

Bacteria are able to respond to environmental signals by changing their rules of movement. When we take into account chemical signals in the environment, this behaviour is often called chemotaxis. At the individual-level, chemotaxis…

偏微分方程分析 · 数学 2007-05-23 Radek Erban , Hyung Ju Hwang

A phase field model for tumour growth is introduced that is based on a Brinkman law for convective velocity fields. The model couples a convective Cahn-Hilliard equation for the evolution of the tumour to a reaction-diffusion-advection…

偏微分方程分析 · 数学 2021-09-07 Matthias Ebenbeck , Harald Garcke , Robert Nürnberg

Endothelial cells are responsible for the formation of the capillary blood vessel network. We describe a system of endothelial cells by means of two-dimensional molecular dynamics simulations of point-like particles. Cells' motion is…

软凝聚态物质 · 物理学 2022-12-22 Paolo Buttà , Fiammetta Cerreti , Vito D. P. Servedio , Livio Triolo

Embryonic tissues deform across broad spatial and temporal scales and relax stress through active rearrangements. A quantitative link between cell-scale activity, spatial forcing, and emergent tissue-scale mechanics remains incomplete.…

生物物理 · 物理学 2025-12-18 Sahil Islam , Mohd. Suhail Rizvi , Anupam Gupta

The mathematical formulation of the model for molecular movement of single motor proteins driven by cyclic biochemical reactions in an aqueous environment leads to a drifted Brownian motion characterized by coupled diffusion equations. In…

统计力学 · 物理学 2007-05-23 Hong Qian