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In infectious disease modelling, the expected time from endemicity to extinction (of infection) may be analysed via WKB approximation, a method with origins in mathematical physics. The method is very general, but its uptake to date may…

动力系统 · 数学 2024-12-20 Damian Clancy , John J. H. Stewart

We describe innovation in terms of a generalized branching process. Each new invention pairs with any existing one to produce a number of offspring, which is Poisson distributed with mean p. Existing inventions die with probability p/\tau…

物理与社会 · 物理学 2015-05-18 Vishal Sood , Myléne Mathieu , Amer Shreim , Peter Grassberger , Maya Paczuski

One of the popular dynamics on complex networks is the epidemic spreading. An epidemic model describes how infections spread throughout a network. Among the compartmental models used to describe epidemics, the…

物理与社会 · 物理学 2011-07-14 Faryad Darabi Sahneh , Caterina Scoglio

A stochastic model for the growth of a virus in a cell population is introduced. The virus has two ways of spreading: either by allowing its host cell to live on and duplicate, or else by multiplying in large numbers within the host cell…

细胞行为 · 定量生物学 2012-10-30 Jakob E. Björnberg , Tom Britton , Erik I. Broman , Eviatar Natan

This article examines how diseases on random networks spread in time. The disease is described by a probability distribution function for the number of infected and recovered individuals, and the probability distribution is described by a…

适应与自组织系统 · 物理学 2013-05-29 M. Marder

The Markovian approach, which assumes exponentially distributed interinfection times, is dominant in epidemic modeling. However, this assumption is unrealistic as an individual's infectiousness depends on its viral load and varies over…

种群与进化 · 定量生物学 2023-08-02 Qihui Yang , Joan Saldaña , Caterina Scoglio

We propose a novel, tractable latent state inference scheme for Markov jump processes, for which exact inference is often intractable. Our approach is based on an entropic matching framework that can be embedded into the well-known…

机器学习 · 计算机科学 2026-02-27 Yannick Eich , Bastian Alt , Heinz Koeppl

Spatial spread of infectious diseases among populations via the mobility of humans is highly stochastic and heterogeneous. Accurate forecast/mining of the spread process is often hard to be achieved by using statistical or mechanical…

社会与信息网络 · 计算机科学 2016-11-18 Jian-Bo Wang , Lin Wang , Xiang Li

We study a model for the spread of an infectious disease which incorporates spatial and temporal effects. The model is a delayed multi-type branching process in which types represent geographic regions while infected individuals reproduce…

概率论 · 数学 2023-01-27 Andrew Hart , Servet Martínez

Numerical simulation of continuous-time Markovian processes is an essential and widely applied tool in the investigation of epidemic spreading on complex networks. Due to the high heterogeneity of the connectivity structure through which…

物理与社会 · 物理学 2017-07-26 Wesley Cota , Silvio C. Ferreira

Representations of branching Markov processes and their measure-valued limits in terms of countable systems of particles are constructed for models with spatially varying birth and death rates. Each particle has a location and a "level,"…

概率论 · 数学 2011-04-11 Thomas G. Kurtz , Eliane R. Rodrigues

Intuitively, sampling is likely to be more efficient for prevalence estimation, if the cases (or positives) have a relatively higher representation in the sample than in the population. In case the virus is transmitted via personal…

应用统计 · 统计学 2020-11-18 Li-Chun Zhang

This paper is concerned with the growth rate of SIR (Susceptible-Infectious-Recovered) epidemics with general infectious period distribution on random intersection graphs. This type of graph is characterized by the presence of cliques…

概率论 · 数学 2025-08-13 Carolina Fransson

We study the contact process on a random bipartite connection hypergraph generated from two Poisson point processes, with mark-dependent connection thresholds. For asymmetric infection rates and asymmetric power law tail decays of the two…

概率论 · 数学 2026-04-02 John Fernley , Christian Hirsch , Daniel Valesin

We study that the breakdown of epidemic depends on some parameters, that is expressed in epidemic reproduction ratio number. It is noted that when $R_0 $ exceeds 1, the stochastic model have two different results. But, eventually the…

统计理论 · 数学 2018-03-19 Kurnia Susvitasari

Several systems can be modeled as sets of interdependent networks where each network contains distinct nodes. Diffusion processes like the spreading of a disease or the propagation of information constitute fundamental phenomena occurring…

社会与信息网络 · 计算机科学 2015-06-23 Mostafa Salehi , Payam Siyari , Matteo Magnani , Danilo Montesi

We consider a discrete-time host-parasite model for a population of cells which are colonized by proliferating parasites. The cell population grows like an ordinary Galton-Watson process, but in reflection of real biological settings the…

概率论 · 数学 2015-05-18 Gerold Alsmeyer , Sören Gröttrup

We study the Susceptible-Infected-Recovered model of epidemics in the vicinity of the threshold infectivity. We derive the distribution of total outbreak size in the limit of large population size $N$. This is accomplished by mapping the…

种群与进化 · 定量生物学 2009-11-13 David A. Kessler , Nadav M. Shnerb

Under mild non-degeneracy assumptions on branching rates in each generation, we provide a criterion for almost-sure extinction of a multi-type branching process with time-dependent branching rates. We also provide a criterion for the total…

概率论 · 数学 2018-11-22 Dmitry Dolgopyat , Pratima Hebbar , Leonid Koralov , Mark Perlman

Complex models used to describe biological processes in epidemiology and ecology often have computationally intractable or expensive likelihoods. This poses significant challenges in terms of Bayesian inference but more significantly in the…

统计方法学 · 统计学 2019-03-12 Mahasen Dehideniya , Antony M. Overstall , Chris C. Drovandi , James M. McGree