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Oscillations of free intracellular calcium concentration are thought to be important in the control of a wide variety of physiological phenomena, and there is long-standing interest in understanding these oscillations via the investigation…

Dynamical Systems · Mathematics 2024-01-31 Behnaz Rahmani , Samuel Jelbart , Vivien Kirk , James Sneyd

We present a mathematical model which explains and interprets a novel form of short-term potentiation, which was found to be use-, but not time-dependent, in experiments done on Lymnaea neurons. The high degree of potentiation is explained…

Biological Physics · Physics 2014-03-05 Anita Mehta , Jean-Marc Luck , Collin C. Luk , Naweed I. Syed

Neuromorphic Computing (NC), which emulates neural activities of the human brain, is considered for low-power implementation of artificial intelligence. Towards realizing NC, fabrication, and investigations of hardware elements such as…

Materials Science · Physics 2021-09-21 P. Monalisha , P. S. Anil Kumar , X. Renshaw Wang , S. N. Piramanayagam

From nanoscale devices including sensors, electronics, or biocompatible coatings to macroscale structural, automotive or aerospace components, fundamental understanding of plasticity and fracture can guide the realization of materials that…

Materials Science · Physics 2025-05-14 D. G. Sangiovanni , A. Kjellén , F. Trybel , L. J. S. Johnson , M. Odén , F. Tasnádi , I. A. Abrikosov

Proliferating cells properly divide into their daughter cells through a process that is mediated by kinetochores, protein-complexes that assemble at the centromere of each sister chromatid. Each kinetochore has to establish a tight bipolar…

Subcellular Processes · Quantitative Biology 2017-06-13 Bashar Ibrahim

We consider here a single-compartment model of these neurons which is capable of describing many of the known features of spike generation, particularly the slow rhythmic pacemaking activity often observed in these cells in a variety of…

Neurons and Cognition · Quantitative Biology 2012-12-06 Henry C. Tuckwell , Nicholas J. Penington

The model for cAMP-dependent synaptic plasticity relates the characterization of a noradrenaline-stimulated adenylyl cyclase with DNA unzipping. Specific proteins condition cAMP insertion in specific sites of the DNA structure to direct…

Biomolecules · Quantitative Biology 2016-06-28 Alfred Bennun

Latency reduction of postsynaptic spikes is a well-known effect of Synaptic Time-Dependent Plasticity. We expand this notion for long postsynaptic spike trains, showing that, for a fixed input spike train, STDP reduces the number of…

Neurons and Cognition · Quantitative Biology 2019-07-26 Pau Vilimelis Aceituno , Masud Ehsani , Jürgen Jost

Excitatory synaptic connections in the adult neocortex consist of multiple synaptic contacts, almost exclusively formed on dendritic spines. Changes of dendritic spine shape and volume, a correlate of synaptic strength, can be tracked in…

Neurons and Cognition · Quantitative Biology 2018-03-13 Moritz Deger , Alexander Seeholzer , Wulfram Gerstner

Learning and memory relies on synapses changing their strengths in response to neural activity. However there is a substantial gap between the timescales of neural electrical dynamics (1-100 ms) and organism behaviour during learning…

Neurons and Cognition · Quantitative Biology 2023-08-08 Cian O'Donnell

Serotonergic neurons of the dorsal raphe nuclei, with their extensive innervation of nearly the whole brain have important modulatory effects on many cognitive and physiological processes. They play important roles in clinical depression…

Neurons and Cognition · Quantitative Biology 2012-12-06 Henry C. Tuckwell

The brain is a nonlinear and highly Recurrent Neural Network (RNN). This RNN is surprisingly plastic and supports our astonishing ability to learn and execute complex tasks. However, learning is incredibly complicated due to the brain's…

Neural and Evolutionary Computing · Computer Science 2023-03-14 Mohammad Modiri

Neuronal dynamics are fundamentally constrained by the underlying structural network architecture, yet much of the details of this synaptic connectivity are still unknown even in neuronal cultures in vitro. Here we extend a previous…

Neurons and Cognition · Quantitative Biology 2017-02-08 Javier G. Orlandi , Olav Stetter , Jordi Soriano , Theo Geisel , Demian Battaglia

Calcium imaging permits optical measurement of neural activity. Since intracellular calcium concentration is an indirect measurement of neural activity, computational tools are necessary to infer the true underlying spiking activity from…

Machine Learning · Statistics 2017-11-07 Artur Speiser , Jinyao Yan , Evan Archer , Lars Buesing , Srinivas C. Turaga , Jakob H. Macke

Future neuromorphic architectures will require millions of artificial synapses, making understanding the physical mechanisms behind their plasticity functionalities mandatory. In this work, we propose a simplified spin memristor, where the…

Applied Physics · Physics 2024-09-13 J. O. Castro , B. Buyatti , D. Mercado , A. Di Donato , M. Quintero , M. Tortarolo

Microbially induced calcite precipitation (MICP) is a new and sustainable technology which utilizes biochemical processes to create barriers by calcium carbonate cementation; therefore, this technology has a potential to be used for sealing…

Geophysics · Physics 2021-02-02 David Landa-Marbán , Svenn Tveit , Kundan Kumar , Sarah E. Gasda

Motivated by recent experimental studies, we derive and analyze a twodimensional model for the contraction patterns observed in protoplasmic droplets of Physarum polycephalum. The model couples a model of an active poroelastic two-phase…

Pattern Formation and Solitons · Physics 2018-11-21 Markus Radszuweit , Harald Engel , Markus Bär

We derive a mode-coupling theory for the slow dynamics of fluids confined in disordered porous media represented by spherical particles randomly placed in space. Its equations display the usual nonlinear structure met in this theoretical…

Soft Condensed Matter · Physics 2007-05-23 V. Krakoviack

We consider particle filters with weakly informative observations (or `potentials') relative to the latent state dynamics. The particular focus of this work is on particle filters to approximate time-discretisations of continuous-time…

Computation · Statistics 2022-07-12 Nicolas Chopin , Sumeetpal S. Singh , Tomás Soto , Matti Vihola

The objective of this work is to assess computationally efficient coarse-grained plasticity models against high-fidelity crystal plasticity simulations for magnesium polycrystals over a wide range of textures and grain sizes. A basic…

Materials Science · Physics 2026-01-13 R. Vigneshwaran , Showren Datta , A. A. Benzerga , Shailendra P. Joshi
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