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We have used the Nernst chemical potential treatment to couple the time domains of sodium and calcium ion channel opening and closing rates to the spatial domain of the diffusing waves of the travelling calcium ions inside single cells. The…

Neurons and Cognition · Quantitative Biology 2019-03-19 Keith R Willison

We investigate the production of long lived metastable (3P2, n=4) calcium atoms in a magneto-optical trap operating on the 1S0 to 1P1 transition at 423 nm. For excited 1P1-atoms a weak decay channel into the triplet states 3P2 and 3P1…

Atomic Physics · Physics 2009-11-07 Jan Gruenert , Andreas Hemmerich

We investigate the melting behavior of calcium oxide (CaO) under extreme conditions, a problem that remains poorly constrained due to experimental limitations despite its relevance for geophysical and technological applications. We develop…

Materials Science · Physics 2026-05-15 Francesca Menescardi , Stefano de Gironcoli

We propose a strategy for quantitative photoacoustic mapping of chromophore concentrations that can be performed purely experimentally. We exploit the possibility of acousto-optic modulation using focused ultrasound, and the principle that…

Optics · Physics 2012-07-23 Khalid Daoudi , Wiendelt Steenbergen

An exhaustive kinetic model for the atoms in a 1D Magneto-Optical Trap is derived, without any approximations. It is shown that the atomic density is described by a Vlasov-Fokker-Planck equation, coupled with two simple differential…

Atomic Physics · Physics 2015-05-19 Rudy Romain , Daniel Hennequin , Philippe Verkerk

Neuronal calcium (Ca2+) signaling represents a molecular trigger for diverse central nervous system adaptations and maladaptions. The altered function of dorsal spinal inhibitory interneurons is strongly implicated in the mechanisms…

Neurons and Cognition · Quantitative Biology 2019-02-19 Anna M. Hagenston , Sara Ben Ayed , Hilmar Bading

The simulation of industrial processes involving cold compaction of powders allows for the optimization of the production of both traditional and advanced ceramics. The capabilities of a constitutive model previously proposed by the authors…

Materials Science · Physics 2014-04-30 S. Stupkiewicz , A. Piccolroaz , D. Bigoni

A generalized version of the Wilson-Cowan (WC) model is proposed which accounts for the evolution of the synaptic resources. Adiabatic elimination of the fast variables is performed to yield a simplified framework for the coupled…

Disordered Systems and Neural Networks · Physics 2025-11-21 Tommaso Trabocchi , Raffaella Burioni , Lucilla de Arcangelis , Duccio Fanelli

In this study, we explored the utility of a descriptive and predictive bionetwork model for phospholipase C-coupled calcium signaling pathways, built with non-kinetic experimental information. Boolean models generated from these data yield…

Molecular Networks · Quantitative Biology 2009-12-14 Gaurav Bhardwaj , Christine P. Wells , Reka Albert , Damian B. van Rossum , Randen L. Patterson

We propose a scheme of "$R$-type" photoassociative adiabatic passage (PAP) to create polar molecular condensates from two different species of ultracold atoms. Due to the presence of a quasi-coherent population trapping state in the scheme,…

Quantum Gases · Physics 2015-05-18 Jing Qian , Lu Zhou , Keye Zhang , Weiping Zhang

Biological and artificial learning systems alike confront the plasticity-stability dilemma. In the brain, neuromodulators such as acetylcholine and noradrenaline relieve this tension by tuning neuronal gain and inhibitory gating, balancing…

Neurons and Cognition · Quantitative Biology 2025-07-14 Alejandro Rodriguez-Garcia , Christopher J. Whyte , Brandon R. Munn , Jie Mei , James M. Shine , Srikanth Ramaswamy

Ceramics are easy to break, and very few generic mechanisms are available for improving their mechanical properties, e.g., the 1975-discovered anti-fracture mechanism is strictly limited to zirconia and hafnia. Here we report a general…

Materials Science · Physics 2021-02-02 Haidong Bian , Quanfeng He , Junhua Luan , Yu Bu , Yong Yang , Zhengtao Xu , Jian Lu , Yang Yang Li

This work presents a unified viscoelastic-viscoplastic continuum framework for modeling rate-dependent granular flows across regimes. The formulation incorporates two distinct rate-dependent mechanisms, namely micro-inertia and viscoelastic…

Soft Condensed Matter · Physics 2026-04-28 Bodhinanda Chandra , Sachith Dunatunga , Ken Kamrin

Interactions between a protein and a ligand are often accompanied by a redistribution of the population of thermally accessible conformations. This dynamic response of the protein's functional energy landscape enables a protein to modulate…

Biological Physics · Physics 2016-03-15 Prithviraj Nandigrami , John J. Portman

In this study, we propose and analyze in simulations a new, highly flexible method of implementing synaptic plasticity in a wafer-scale, accelerated neuromorphic hardware system. The study focuses on globally modulated STDP, as a special…

Neurons and Cognition · Quantitative Biology 2013-08-21 Simon Friedmann , Nicolas Frémaux , Johannes Schemmel , Wulfram Gerstner , Karlheinz Meier

A theory for light-induced current by strong optical pulses in molecular-tunneling junctions is described. We consider a molecular bridge represented by its highest occupied and lowest unoccupied levels, HOMO and LUMO, respectively. We take…

Mesoscale and Nanoscale Physics · Physics 2009-11-13 B. D. Fainberg , M. Jouravlev , A. Nitzan

The calcium (Ca$^{2+}$) signalling system is important for many cellular processes within the human body. Signals are transmitted within the cell by releasing Ca$^{2+}$ from the endoplasmic reticulum (ER) into the cytosol via clusters of…

Quantitative Methods · Quantitative Biology 2024-02-01 Molly Hawker , Pengxing Cao , James Sneyd , Ivo Siekmann

We study the characteristics of weak signal detection by a recurrent neuronal network with plastic synaptic coupling. It is shown that in the presence of an asynchronous component in synaptic transmission, the network acquires selectivity…

Neurons and Cognition · Quantitative Biology 2015-05-13 Vladislav Volman , Herbert Levine

Short-term presynaptic plasticity designates variations of the amplitude of synaptic information transfer whereby the amount of neurotransmitter released upon presynaptic stimulation changes over seconds as a function of the neuronal firing…

Neurons and Cognition · Quantitative Biology 2011-12-06 Maurizio De Pittà , Vladislav Volman , Hugues Berry , Eshel Ben-Jacob

Brain-inspired machine intelligence research seeks to develop computational models that emulate the information processing and adaptability that distinguishes biological systems of neurons. This has led to the development of spiking neural…

Neural and Evolutionary Computing · Computer Science 2024-10-28 Alexander Ororbia
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