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Bacterial colonies can form a wide variety of shapes and structures based on ambient and internal conditions. To help understand the mechanisms that determine the structure of and the diversity within these colonies, various numerical…

软凝聚态物质 · 物理学 2024-12-24 Bryan Verhoef , Rutger Hermsen , Joost de Graaf

Cellular actin structures are continuously turned over while keeping similar sizes. Since they all compete for a shared pool of actin monomers, the question arises how they can coexist in these dynamic steady states. Recently, the…

亚细胞过程 · 定量生物学 2026-04-27 Valentin Wössner , Falko Ziebert , Ulrich S. Schwarz

We consider a discrete-time model for random interface growth which admits exact formulas and converges to the Polynuclear growth model in a particular limit. The height of the interface is initially flat and the evolution involves the…

概率论 · 数学 2023-08-28 Will FitzGerald

In the present work, we consider the evolution of two fluids separated by a sharp interface in the presence of surface tension - like, for example, the evolution of oil bubbles in water. Our main result is a weak-strong uniqueness principle…

偏微分方程分析 · 数学 2020-02-26 Julian Fischer , Sebastian Hensel

The simultaneous growth of multiple microbial species is a problem of fundamental ecological interest. In media containing more than one growth-limiting substrate, multiple species can coexist. The question then arises: Can single-species…

种群与进化 · 定量生物学 2007-05-23 Atul Narang , Sergei S. Pilyugin

Mathematical models come in many forms across biological applications. In the case of complex, spatial dynamics and pattern formation, stochastic models also face two main challenges: pattern data is largely qualitative, and model…

细胞行为 · 定量生物学 2022-12-26 Electa Cleveland , Angela Zhu , Bjorn Sandstede , Alexandria Volkening

Ecological models traditionally explain stability and coexistence through pairwise interactions among species. These interactions can also involve groups of three or more species, higher-order interactions, which recent theory suggests can…

种群与进化 · 定量生物学 2025-10-07 Marc Duran-Sala , Sandro Meloni , Violeta Calleja-Solanas

Collective dynamics can be observed among many animal species, and have given rise in the last decades to an active and interdisciplinary field of study. Such behaviors are often modeled by active matter, in which each individual is…

数学物理 · 物理学 2021-08-31 Clément Erignoux

I examine the effect of exogenous spatial heterogeneity on the coexistence of competing species using a simple model of non-hierarchical competition for site occupancy on a lattice. The sites on the lattice are divided into two types…

种群与进化 · 定量生物学 2011-10-17 Ilmari Karonen

The presence of one or more species at some spatial locations but not others is a central matter in ecology. This phenomenon is related to ecological pattern formation. Nonlocal interactions can be considered as one of the mechanisms…

种群与进化 · 定量生物学 2017-12-29 Ozgur Aydogmus

We propose a type-dependent branching model with mutation and competition for modeling phylogenies of a virus population. The competition kernel depends for any two virus particles on the particles' types, the total mass of the population…

概率论 · 数学 2017-05-10 Sandra Kliem , Anita Winter

We present a theoretical study for the intermediate stages of the growth of membranes and vesicles in supersaturated solutions of amphiphilic molecules. The problem presents important differences with the growth of droplets in the classical…

凝聚态物理 · 物理学 2009-10-28 A. M. Somoza , U. Marini Bettolo Marconi , P. Tarazona

Cooperation is ubiquitous in biological and social systems. Previous studies revealed that a preference toward similar appearance promotes cooperation, a phenomenon called tag-mediated cooperation or communitarian cooperation. This effect…

种群与进化 · 定量生物学 2017-04-06 Genki Ichinose , Masaya Saito , Hiroki Sayama , Hugues Bersini

Microbial populations generally evolve in volatile environments, under conditions fluctuating between harsh and mild, e.g. as the result of sudden changes in toxin concentration or nutrient abundance. Environmental variability thus shapes…

种群与进化 · 定量生物学 2023-12-07 Matthew Asker , Lluís Hernández-Navarro , Alastair M. Rucklidge , Mauro Mobilia

What determines whether an organism or collective will survive under particular conditions? This question is asked across the life sciences when determining adaptive fit, developing efficacious treatments for diseases, and assessing the…

定量方法 · 定量生物学 2026-05-19 Connor McShaffrey , Randall D. Beer

We consider the dynamics of a virus spreading through a population that produces a mutant strain with the ability to infect individuals that were infected with the established strain. Temporary cross-immunity is included using a time delay,…

种群与进化 · 定量生物学 2023-02-16 Bruce Pell , Samantha Brozak , Tin Phan , Fuqing Wu , Yang Kuang

Model reduction is a central topic in systems biology and dynamical systems theory, for reducing the complexity of detailed models, finding important parameters, and developing multi-scale models for instance. While perturbation theory is a…

分子网络 · 定量生物学 2014-01-27 Sylvain Soliman , Francois Fages , Ovidiu Radulescu

We study the mathematical theory of second order systems with two species, arising in the dynamics of interacting particles subject to linear damping, to nonlocal forces and to external ones, and resulting into a nonlocal version of the…

偏微分方程分析 · 数学 2022-10-13 Marco Di Francesco , Simone Fagioli , Valeria Iorio

Many natural ecosystems harbor large numbers of coexisting species competing for far fewer distinct resources, in apparent defiance of the competitive exclusion principle. Various mechanisms have been proposed to explain this apparent…

种群与进化 · 定量生物学 2026-03-24 Leonardo Aguirre , José A. Capitán , David Alonso

Empirical observations in marine ecosystems have suggested a balance of biological and advection time scales as a possible explanation of species coexistence. To characterise this scenario, we measure the time to fixation in neutrally…

种群与进化 · 定量生物学 2018-04-09 Tobias Galla , Vicente Pérez-Muñuzuri